Evidence map›Paper›PMID 25904240›Full record

ArticleNMR in biomedicine2015

Feasibility and reproducibility of neurochemical profile quantification in the human hippocampus at 3 T.

Petr Bednařík, Amir Moheet, Dinesh K Deelchand, Uzay E Emir, Lynn E Eberly, Martin Bareš, Elizabeth R Seaquist, Gülin Öz

Abstract read
In one paragraph

Article in NMR in biomedicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Human brain functional MRS reveals interplay of metabolites implicated in neurotransmission and neuroenergetics.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2022
    Article
  12. In VivoNeurochemical research · 2022
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Metabolic underpinnings of activated and deactivated cortical areas in human brain.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Petr BednaříkCenter for Magnetic Resonance Research, Department of Radiology, Medical School, University of Minnesota, Minneapolis, MN, USA.
Amir MoheetDivision of Endocrinology and Diabetes, Department of Medicine, University of Minnesota, Minneapolis, MN, USA.
Dinesh K DeelchandCenter for Magnetic Resonance Research, Department of Radiology, Medical School, University of Minnesota, Minneapolis, MN, USA.
Uzay E EmirCenter for Magnetic Resonance Research, Department of Radiology, Medical School, University of Minnesota, Minneapolis, MN, USA.
Lynn E EberlyDivision of Biostatistics, School of Public Health, University of Minnesota, Minneapolis, MN, USA.
Martin BarešBehavioral and Social Neuroscience Research Group, Central European Institute of Technology, CEITEC MU, Brno, Czech Republic.
Elizabeth R SeaquistDivision of Endocrinology and Diabetes, Department of Medicine, University of Minnesota, Minneapolis, MN, USA.
Gülin ÖzCenter for Magnetic Resonance Research, Department of Radiology, Medical School, University of Minnesota, Minneapolis, MN, USA.

Funding

University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR000114 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R · 2012 to 2015
$35.0M
ZOOMED FUNCT IMAGING IN HUMAN BRAIN AT 7T W/ SIMULT HIGH SPATIAL &TEMPORAL RESP41RR008079 · NCRR · UNIVERSITY OF MINNESOTA TWIN CITIES · PI UGURBIL, KAMIL · 1993 to 2011
$16.3M
NMR Imaging and SpectroscopyP41EB015894 · NIBIB · UNIVERSITY OF MINNESOTA · PI UGURBIL, KAMIL · 2012 to 2017
$8.4M
Measurement of glucose homestatsis in human brain by NMRR01NS035192 · NINDS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI OZ, GULIN, SEAQUIST, ELIZABETH R. · 1997 to 2022
$8.3M
University of Minnesota Clinical and Translational Science Institute (UMN CTSI)KL2TR000113 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R · 2012 to 2015
$5.4M
Institutional Center Cores for Advanced NeuroimagingP30NS076408 · NINDS · UNIVERSITY OF MINNESOTA · PI UGURBIL, KAMIL · 2012 to 2020
$4.2M
Magnetic Resonance Spectroscopy Biomarkers of NeurodegenerationR01NS070815 · NINDS · UNIVERSITY OF MINNESOTA · PI OZ, GULIN · 2010 to 2014
$1.6M
NCATS NIH HHS 5KL2TR113NCATS NIH HHS KL2 TR000113NCATS NIH HHS UL1 TR000114NCRR NIH HHS P41 RR008079NIBIB NIH HHS P41 EB015894NINDS NIH HHS P30 NS076408NINDS NIH HHS R01 NS035192NINDS NIH HHS R01 NS070815
6 · The paper itself

Abstract

Hippocampal dysfunction is known to be associated with several neurological and neuropsychiatric disorders such as Alzheimer's disease, epilepsy, schizophrenia and depression; therefore, there has been significant clinical interest in studying hippocampal neurochemistry. However, the hippocampus is a challenging region to study using (1) H MRS, hence the use of MRS for clinical research in this region has been limited. Our goal was therefore to investigate the feasibility of obtaining high-quality hippocampal spectra that allow reliable quantification of a neurochemical profile and to establish inter-session reproducibility of hippocampal MRS, including reproducibility of voxel placement, spectral quality and neurochemical concentrations. Ten healthy volunteers were scanned in two consecutive sessions using a standard clinical 3 T MR scanner. Neurochemical profiles were obtained with a short-echo (T(E) = 28 ms) semi-LASER localization sequence from a relatively small (~4 mL) voxel that covered about 62% of the hippocampal volume as calculated from segmentation of T1 -weighted images. Voxel composition was highly reproducible between sessions, with test-retest coefficients of variation (CVs) of 3.5% and 7.5% for gray and white matter volume fraction, respectively. Excellent signal-to-noise ratio (~54 based on the N-acetylaspartate (NAA) methyl peak in non-apodized spectra) and linewidths (~9 Hz for water) were achieved reproducibly in all subjects. The spectral quality allowed quantification of NAA, total choline, total creatine, myo-inositol and glutamate with high scan-rescan reproducibility (CV ≤ 6%) and quantification precision (Cramér-Rao lower bound, CRLB < 9%). Four other metabolites, including glutathione and glucose, were quantified with scan-rescan CV below 20%. Therefore, the highly optimized, short-echo semi-LASER sequence together with FASTMAP shimming substantially improved the reproducibility and number of quantifiable metabolites relative to prior reports. In addition, the between-session variation in metabolite concentrations, as well as CRLB, was lower than the between-subject variation of the concentrations for most metabolites, indicating that the method has the sensitivity to detect inter-individual differences in the healthy brain.

Indexed as

AdultAlgorithmsBiopolymersFeasibility StudiesFemaleHippocampusHumansMaleMolecular ImagingProton Magnetic Resonance SpectroscopyReproducibility of ResultsSensitivity and SpecificityTissue DistributionBiopolymers3 Tcoefficient of variationhuman hippocampusmetabolitesMRSquantification precisionreproducibilitysegmentation

Identifiers

PMID25904240
PMCPMC4454404

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.