Evidence map›Paper›PMID 25904160›Full record

ArticleNature communications2015

APOBEC family mutational signatures are associated with poor prognosis translocations in multiple myeloma.

Brian A Walker, Christopher P Wardell, Alex Murison, Eileen M Boyle, Dil B Begum, Nasrin M Dahir, Paula Z Proszek, Lorenzo Melchor, Charlotte Pawlyn, Martin F Kaiser and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 215 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
215citing papers in PubMed, 4 pooled it
16.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

215 citing papers in PubMed, 4 syntheses or guidelines pooled it, 312 citations in OpenAlex.

  1. International Myeloma Society/International Myeloma Working Group Consensus Recommendations on the Definition of High-Risk Multiple Myeloma.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2025
    Guideline
  2. Pooled it
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  4. Pooled it
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  8. The Spectrum and Clinical Impact of Epigenetic Modifier Mutations in Myeloma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2016
    Trial
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  11. Article
  12. Article
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  14. Observational
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155 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Brian A WalkerDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.ORCID 0000000286156254
Christopher P WardellDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
Alex MurisonDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
Eileen M BoyleDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
Dil B BegumDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
Nasrin M DahirDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
Paula Z ProszekDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
Lorenzo MelchorDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
Charlotte PawlynDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
Martin F KaiserDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
David C JohnsonDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.ORCID 0000000308873343
Ya-Wei QiangMyeloma Institute, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.
John R JonesDivision of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK.
David A CairnsClinical Trials Research Unit, University of Leeds, Leeds LS2 9JT, UK.
Walter M GregoryClinical Trials Research Unit, University of Leeds, Leeds LS2 9JT, UK.
Roger G OwenSt James's University Hospital, University of Leeds, Leeds LS2 9JT, UK.
Gordon CookSt James's University Hospital, University of Leeds, Leeds LS2 9JT, UK.
Mark T DraysonClinical Immunology, School of Immunity &Infection, University of Birmingham, Birmingham B15 2TT, UK.
Graham H JacksonDepartment of Haematology, Newcastle University, Newcastle-Upon-Tyne NE1 7RU, UK.
Faith E Davies1] Division of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK [2] Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.
Gareth J Morgan1] Division of Molecular Pathology, The Institute of Cancer Research, London SM2 5NG, UK [2] Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA.
Institute of Cancer Research · GBUniversity of Leeds · GBNewcastle University · GBUniversity of Arkansas for Medical Sciences · USUniversity of Birmingham · GB

Funding

Cancer Research UK A10410Cancer Research UK A12136Cancer Research UK A14261Cancer Research UK A17761Cancer Research UK A9941Medical Research Council G0100132Medical Research Council MR/L01629X/1
6 · The paper itself

Abstract

We have sequenced 463 presenting cases of myeloma entered into the UK Myeloma XI study using whole exome sequencing. Here we identify mutations induced as a consequence of misdirected AID in the partner oncogenes of IGH translocations, which are activating and associated with impaired clinical outcome. An APOBEC mutational signature is seen in 3.8% of cases and is linked to the translocation-mediated deregulation of MAF and MAFB, a known poor prognostic factor. Patients with this signature have an increased mutational load and a poor prognosis. Loss of MAF or MAFB expression results in decreased APOBEC3B and APOBEC4 expression, indicating a transcriptional control mechanism. Kataegis, a further mutational pattern associated with APOBEC deregulation, is seen at the sites of the MYC translocation. The APOBEC mutational signature seen in myeloma is, therefore, associated with poor prognosis primary and secondary translocations and the molecular mechanisms involved in generating them.

Indexed as

AdultAgedAged, 80 and overCytidine DeaminaseFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMafB Transcription FactorMaleMiddle AgedMinor Histocompatibility AntigensMultiple MyelomaMutationPrognosisProto-Oncogene Proteins c-mafAPOBEC3B protein, humanAPOBEC4 protein, humanCytidine DeaminaseMAFB protein, humanMafB Transcription FactorMAF protein, humanMinor Histocompatibility AntigensProto-Oncogene Proteins c-mafProto-Oncogene Proteins c-myc

Identifiers

PMID25904160
PMCPMC4568299
OpenAlexW2059995794

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.