Evidence map›Paper›PMID 25903568›Full record

ArticleJournal of clinical microbiology2015

Aspergillus-Specific Lateral-Flow Device and Real-Time PCR Testing of Bronchoalveolar Lavage Fluid: a Combination Biomarker Approach for Clinical Diagnosis of Invasive Pulmonary Aspergillosis.

Gemma L Johnson, Shah-Jalal Sarker, Francesco Nannini, Arianna Ferrini, Emma Taylor, Cornelia Lass-Flörl, Wolfgang Mutschlechner, Stephen A Bustin, Samir G Agrawal

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 2 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 2 syntheses or guidelines pooled it, 50 citations in OpenAlex.

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  10. Strategies for the management of invasive fungal infections due to filamentous fungi in high-risk hemato-oncological patients.Revista espanola de quimioterapia : publicacion oficial de la Sociedad Espanola de Quimioterapia · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Gemma L JohnsonBlizard Institute of Cell and Molecular Science, Queen Mary University of London, London, United Kingdom gemma.johnson@bartshealth.nhs.uk s.g.agrawal@qmul.ac.uk.
Shah-Jalal SarkerCentre for Experimental Cancer Medicine, Barts Cancer Institute, Queen Mary University of London, London, United Kingdom.
Francesco NanniniBlizard Institute of Cell and Molecular Science, Queen Mary University of London, London, United Kingdom.
Arianna FerriniBlizard Institute of Cell and Molecular Science, Queen Mary University of London, London, United Kingdom.
Emma TaylorPublic Health Laboratory London, Public Health England, London, United Kingdom.
Cornelia Lass-FlörlDivision of Hygiene and Medical Microbiology, Innsbruck Medical University, Innsbruck, Austria.
Wolfgang MutschlechnerDivision of Hygiene and Medical Microbiology, Innsbruck Medical University, Innsbruck, Austria.
Stephen A BustinPostgraduate Medical Institute, Faculty of Medical Science, Anglia Ruskin University, Chelmsford, United Kingdom.
Samir G AgrawalBlizard Institute of Cell and Molecular Science, Queen Mary University of London, London, United Kingdom Department of Haemato-Oncology, St. Bartholomew's Hospital, London, United Kingdom gemma.johnson@bartshealth.nhs.uk s.g.agrawal@qmul.ac.uk.
Queen Mary University of London · GBInnsbruck Medical University · ATAnglia Ruskin University · GBPublic Health England · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clinical experience with the impact of serum biomarkers for invasive fungal disease (IFD) varies markedly in hemato-oncology. Invasive pulmonary aspergillosis (IPA) is the most common manifestation, so we evaluated biomarkers in bronchoalveolar lavage (BAL) fluid. An Aspergillus-specific lateral-flow device (LFD), quantitative real-time PCR (qPCR), and the galactomannan (GM) test were used with 32 BAL fluid samples from 32 patients at risk of IPA. Eight patients had proven IPA, 3 had probable IPA, 6 had possible IPA, and 15 patients had no IPA by European Organization for Research and Treatment of Cancer Invasive Fungal Infections Cooperative Group/Mycoses Study Group of the National Institute of Allergy and Infectious Diseases (EORTC/MSG) criteria. The diagnostic accuracies of the tests were evaluated, and pairwise agreement between biomarkers was calculated. The diagnostic performance of the EORTC/MSG criteria was evaluated against the test(s) identified to be the most useful for IPA diagnosis. Using the EORTC/MSG criteria, the sensitivities of qPCR and LFD were 100% and the sensitivity of the GM test was 87.5% (GM test index cutoff, >0.8), with the tests having specificities of between 66.7 and 86.7%. The agreement between the results of qPCR and LFD was almost perfect (Cohen's kappa coefficient = 0.93, 95% confidence interval, 0.81 to 1.00). LFD and qPCR combined had a sensitivity of 100% and a specificity of 85.7%. Calcofluor staining and culture of all BAL fluid samples were negative for fungal infection. The median time from the start of mold-active antifungal therapy to the time of collection of BAL fluid was 6 days. Reversing roles and using dual testing by LFD and qPCR to classify cases, the EORTC/MSG criteria had a sensitivity of 83.3%. All three tests are useful for the diagnosis of IPA in BAL fluid samples. Despite the significant delays between the start of antifungal therapy and bronchoscopy, unlike microscopy and culture, the biomarkers remained informative. In particular, the combination of LFD and qPCR allows the sensitive and specific detection of IPA.

Indexed as

AdultAntigens, FungalBiomarkersBronchoalveolar Lavage FluidChromatography, AffinityDNA, FungalHumansInvasive Pulmonary AspergillosisReal-Time Polymerase Chain ReactionRetrospective StudiesSensitivity and SpecificityAntigens, FungalBiomarkersDNA, Fungal

Identifiers

PMID25903568
PMCPMC4473207
OpenAlexW2133768021

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.