Evidence map›Paper›PMID 25903125›Full record

ArticleThe Journal of biological chemistry2015

The Evolutionarily Conserved C-terminal Domains in the Mammalian Retinoblastoma Tumor Suppressor Family Serve as Dual Regulators of Protein Stability and Transcriptional Potency.

Satyaki Sengupta, Raj Lingnurkar, Timothy S Carey, Monica Pomaville, Parimal Kar, Michael Feig, Catherine A Wilson, Jason G Knott, David N Arnosti, R William Henry

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Conservation and divergence of C-terminal domain structure in the retinoblastoma protein family.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Satyaki SenguptaFrom the Department of Biochemistry and Molecular Biology, Graduate Program in Physiology, and.
Raj LingnurkarFrom the Department of Biochemistry and Molecular Biology.
Timothy S CareyFrom the Department of Biochemistry and Molecular Biology.
Monica PomavilleFrom the Department of Biochemistry and Molecular Biology.
Parimal KarFrom the Department of Biochemistry and Molecular Biology.
Michael FeigFrom the Department of Biochemistry and Molecular Biology.
Catherine A WilsonDepartment of Animal Science, Michigan State University, East Lansing, Michigan 48824.
Jason G KnottFrom the Department of Biochemistry and Molecular Biology, Department of Animal Science, Michigan State University, East Lansing, Michigan 48824.
David N ArnostiFrom the Department of Biochemistry and Molecular Biology, arnosti@msu.edu.
R William HenryFrom the Department of Biochemistry and Molecular Biology, henryrw@msu.edu.
Michigan State University · US

Funding

Role of Brg1 in Embryo Development and PluripotencyR01GM095347 · NIGMS · MICHIGAN STATE UNIVERSITY · PI KNOTT, JASON GLENN · 2010 to 2013
$1.1M
Analysis of the COP9 signalosome for Retinoblastoma functionR01GM079098 · NIGMS · MICHIGAN STATE UNIVERSITY · PI ARNOSTI, DAVID N · 2007 to 2010
$1.1M
NIGMS NIH HHS R01 GM079098NIGMS NIH HHS R01GM079098NIGMS NIH HHS R01 GM095347NIGMS NIH HHS R01GM095347
6 · The paper itself

Abstract

The retinoblastoma (RB) tumor suppressor and related family of proteins play critical roles in development through their regulation of genes involved in cell fate. Multiple regulatory pathways impact RB function, including the ubiquitin-proteasome system with deregulated RB destruction frequently associated with pathogenesis. With the current study we explored the mechanisms connecting proteasome-mediated turnover of the RB family to the regulation of repressor activity. We find that steady state levels of all RB family members, RB, p107, and p130, were diminished during embryonic stem cell differentiation concomitant with their target gene acquisition. Proteasome-dependent turnover of the RB family is mediated by distinct and autonomously acting instability elements (IE) located in their C-terminal regulatory domains in a process that is sensitive to cyclin-dependent kinase (CDK4) perturbation. The IE regions include motifs that contribute to E2F-DP transcription factor interaction, and consistently, p107 and p130 repressor potency was reduced by IE deletion. The juxtaposition of degron sequences and E2F interaction motifs appears to be a conserved feature across the RB family, suggesting the potential for repressor ubiquitination and specific target gene regulation. These findings establish a mechanistic link between regulation of RB family repressor potency and the ubiquitin-proteasome system.

Indexed as

Amino Acid SequenceAnimalsCell LineConserved SequenceEmbryonic Stem CellsEvolution, MolecularHumansMiceModels, MolecularMolecular Sequence DataProteasome Endopeptidase ComplexProtein StabilityProtein Structure, TertiaryRetinoblastoma ProteinSequence AlignmentTranscription, GeneticProteasome Endopeptidase ComplexRetinoblastoma Proteinretinoblastoma, RB, p107, p130, E2F-DP, cyclin, CDK, protein stability, proteasome, degron, transcriptional repression.

Identifiers

PMID25903125
PMCPMC4505513
OpenAlexW2082339266

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.