Evidence map›Paper›PMID 25902833›Full record

ArticleBMC genetics2015

Admixture mapping of coronary artery calcification in African Americans from the NHLBI family heart study.

Felicia Gomez, Lihua Wang, Haley Abel, Qunyuan Zhang, Michael A Province, Ingrid B Borecki

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Association ofJournal of cardiovascular development and disease · 2024
    Article
  2. Article
  3. Genetics of Subclinical Coronary Atherosclerosis.Current genetic medicine reports · 2018
    Article
  4. Article
  5. Article
  6. Article
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Felicia GomezDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine in St Louis, 4444 Forest Park Blvd, Campus Box 8506, St Louis, MO, 63108, USA. fgomez@wustl.edu.
Lihua WangDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine in St Louis, 4444 Forest Park Blvd, Campus Box 8506, St Louis, MO, 63108, USA. juwang@dsg.wustl.edu.
Haley AbelDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine in St Louis, 4444 Forest Park Blvd, Campus Box 8506, St Louis, MO, 63108, USA. habel@dsg.wustl.edu.
Qunyuan ZhangDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine in St Louis, 4444 Forest Park Blvd, Campus Box 8506, St Louis, MO, 63108, USA. qunyuan@wustl.edu.
Michael A ProvinceDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine in St Louis, 4444 Forest Park Blvd, Campus Box 8506, St Louis, MO, 63108, USA. mprovince@wustl.edu.
Ingrid B BoreckiDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine in St Louis, 4444 Forest Park Blvd, Campus Box 8506, St Louis, MO, 63108, USA. iborecki@wustl.edu.
Washington University in St. Louis · US

Funding

Genetic Architecture of Adiposity in Multiple Large CohortsR01DK089256 · NIDDK · WASHINGTON UNIVERSITY · PI BARANSKI, THOMAS JOHN, LIU, CHING-TI · 2010 to 2016
$4.6M
Probing The Dark Matter of the Genome in the NHLBI Family Heart StudyR01HL117078 · NHLBI · WASHINGTON UNIVERSITY · PI PROVINCE, MICHAEL A. · 2013 to 2016
$3.0M
Post-Doctoral Research Training in Genetic EpidemiologyT32HL091823 · NHLBI · WASHINGTON UNIVERSITY · PI RAO, DABEERU C · 2008 to 2017
$2.1M
NHLBI NIH HHS R01 HL117078NHLBI NIH HHS R01 HL11707802NHLBI NIH HHS T32 HL091823NIDDK NIH HHS R01DK8925601
6 · The paper itself

Abstract

backgroundCoronary artery calcification (CAC) is an imaging biomarker of coronary atherosclerosis. In European Americans, genome-wide association studies (GWAS) have identified several regions associated with coronary artery disease. However, few large studies have been conducted in African Americans. The largest meta-analysis of CAC in African Americans failed to identify genome-wide significant variants despite being powered to detect effects comparable to effects identified in European Americans. Because CAC is different in prevalence and severity in African Americans and European Americans, admixture mapping is a useful approach to identify loci missed by GWAS.

resultsWe applied admixture mapping to the African American cohort of the Family Heart Study and identified one genome-wide significant region on chromosome 12 and three potential regions on chromosomes 6, 15, and 19 that are associated with CAC. Follow-up studies using previously reported GWAS meta-analysis data suggest that the regions identified on chromosome 6 and 15 contain variants that are possibly associated with CAC. The associated region on chromosome 6 contains the gene for BMP-6, which is expressed in vascular calcific lesions.

conclusionsOur results suggest that admixture mapping can be a useful hypothesis-generating tool to identify genomic regions that contribute to complex diseases in genetically admixed populations.

Indexed as

Chromosome MappingAdolescentAdultAtherosclerosisBlack or African AmericanComorbidityCoronary Artery DiseaseFemaleGenome-Wide Association StudyHumansMaleMeta-Analysis as TopicPolymorphism, Single NucleotideRisk FactorsVascular CalcificationYoung Adult

Identifiers

PMID25902833
PMCPMC4417236
OpenAlexW2033229366

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.