Evidence map›Paper›PMID 25902506›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Syringyl lignin production in conifers: Proof of concept in a Pine tracheary element system.

Armin Wagner, Yuki Tobimatsu, Lorelle Phillips, Heather Flint, Barbara Geddes, Fachuang Lu, John Ralph

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 133 citations in OpenAlex.

  1. Review
  2. Article
  3. Factors underlying a latitudinal gradient in the S/G lignin monomer ratio in natural poplar variants.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  4. Review
  5. GM crops & food · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Armin WagnerBiotransformation Department, Scion, 3020, Rotorua 3010, New Zealand;
Yuki TobimatsuDepartment of Biochemistry, University of Wisconsin, Madison, WI 53706; and US Department of Energy's Great Lakes Bioenergy Research Center, The Wisconsin Energy Institute, Madison, WI 53726.
Lorelle PhillipsBiotransformation Department, Scion, 3020, Rotorua 3010, New Zealand;
Heather FlintBiotransformation Department, Scion, 3020, Rotorua 3010, New Zealand;
Barbara GeddesBiotransformation Department, Scion, 3020, Rotorua 3010, New Zealand;
Fachuang LuDepartment of Biochemistry, University of Wisconsin, Madison, WI 53706; and US Department of Energy's Great Lakes Bioenergy Research Center, The Wisconsin Energy Institute, Madison, WI 53726.
John RalphDepartment of Biochemistry, University of Wisconsin, Madison, WI 53706; and US Department of Energy's Great Lakes Bioenergy Research Center, The Wisconsin Energy Institute, Madison, WI 53726 jralph@wisc.edu.
Scion · NZUniversity of Wisconsin–Madison · USGreat Lakes Bioenergy Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conifers (softwoods) naturally lack syringyl units in their lignins, rendering lignocellulosic materials from such species more difficult to process than syringyl-rich hardwood species. Using a transformable Pinus radiata tracheary element (TE) system as an experimental platform, we investigated whether metabolic engineering can be used to create syringyl lignin in conifers. Pyrolysis-GC/MS and 2D-NMR analysis of P. radiata TE cultures transformed to express ferulate 5-hydroxylase (F5H) and caffeic acid O-methyltransferase (COMT) from Liquidambar styraciflua confirmed the production and incorporation of sinapyl alcohol into the lignin polymer. Transformation with F5H was sufficient for the production of syringyl lignin in TEs, but cotransformation with COMT improved its formation. In addition, lower levels of the pathway intermediate 5-hydroxyconiferyl alcohol were evidenced in cotransformation experiments, indicating that the introduction of the COMT overcame the inefficiency of the native pine methyltransferases for supporting sinapyl alcohol production.Our results provide the proof of concept that it is possible to generate a lignin polymer that contains syringyl units in softwood species such as P. radiata, suggesting that it might be possible to retain the outstanding fiber properties of softwoods while imbuing them with the lignin characteristics of hardwoods that are more favorable for industrial processing.

Indexed as

Metabolic EngineeringAlcoholsBiofuelsBiomassCell WallGas Chromatography-Mass SpectrometryGene Expression Regulation, PlantLigninMagnetic Resonance SpectroscopyPinusPlant ProteinsPlants, Genetically ModifiedPolymersTracheophytaTransgenesAlcoholsBiofuelsLigninPlant ProteinsPolymersbioenergylignificationmetabolic engineeringpulpingsoftwood

Identifiers

PMID25902506
PMCPMC4434704
OpenAlexW2091191803

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.