Evidence map›Paper›PMID 25901085›Full record

ArticleThe Plant cell2015

VIH2 Regulates the Synthesis of Inositol Pyrophosphate InsP8 and Jasmonate-Dependent Defenses in Arabidopsis.

Debabrata Laha, Philipp Johnen, Cristina Azevedo, Marek Dynowski, Michael Weiß, Samanta Capolicchio, Haibin Mao, Tim Iven, Merel Steenbergen, Marc Freyer and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
26.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 184 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Science advances · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 5 countries.

Debabrata LahaCenter for Plant Molecular Biology, University of Tübingen, 72076 Tübingen, Germany.ORCID http://orcid.org/0000-0002-7823-5489
Philipp JohnenCenter for Plant Molecular Biology, University of Tübingen, 72076 Tübingen, Germany.ORCID http://orcid.org/0000-0002-4512-9508
Cristina AzevedoMedical Research Council Laboratory for Molecular Cell Biology, University College London, London WC1E 6BT, United Kingdom.
Marek DynowskiZentrum für Datenverarbeitung, University of Tübingen, 72074 Tübingen, Germany.
Michael WeißDepartment of Biology, University of Tübingen, 72076 Tübingen, Germany.
Samanta CapolicchioDepartment of Chemistry, University of Zürich, 8057 Zurich, Switzerland.
Haibin MaoDepartment of Pharmacology, Howard Hughes Medical Institute, University of Washington, Seattle, Washington 98195.
Tim IvenDepartment of Plant Biochemistry, Georg-August-University Göttingen, 37077 Göttingen, Germany.
Merel SteenbergenPlant-Microbe Interactions, Department of Biology, Utrecht University, 3508 TB Utrecht, The Netherlands.
Marc FreyerCenter for Plant Molecular Biology, University of Tübingen, 72076 Tübingen, Germany.
Philipp GauglerCenter for Plant Molecular Biology, University of Tübingen, 72076 Tübingen, Germany.
Marília K F de CamposCenter for Plant Molecular Biology, University of Tübingen, 72076 Tübingen, Germany.
Ning ZhengDepartment of Pharmacology, Howard Hughes Medical Institute, University of Washington, Seattle, Washington 98195.
Ivo FeussnerDepartment of Plant Biochemistry, Georg-August-University Göttingen, 37077 Göttingen, Germany.
Henning J JessenDepartment of Chemistry, University of Zürich, 8057 Zurich, Switzerland.ORCID http://orcid.org/0000-0002-1025-9484
Saskia C M Van WeesPlant-Microbe Interactions, Department of Biology, Utrecht University, 3508 TB Utrecht, The Netherlands.
Adolfo SaiardiMedical Research Council Laboratory for Molecular Cell Biology, University College London, London WC1E 6BT, United Kingdom.
Gabriel SchaafCenter for Plant Molecular Biology, University of Tübingen, 72076 Tübingen, Germany gabriel.schaaf@zmbp.uni-tuebingen.de.ORCID http://orcid.org/0000-0001-9022-4515
University of Tübingen · DEHoward Hughes Medical Institute · USMRC Laboratory for Molecular Cell Biology · GBUniversity of Göttingen · DEUniversity of Zurich · CHUtrecht University · NL

Funding

Structural Studies of cullin-based ubiquitin ligasesR01CA107134 · NCI · UNIVERSITY OF WASHINGTON · PI ZHENG, NING · 2004 to 2013
$3.0M
Howard Hughes Medical InstituteMedical Research Council MC_U122680443Medical Research Council MC_UU_12018/4NCI NIH HHS R01 CA107134NCI NIH HHS R01CA107134
6 · The paper itself

Abstract

Diphosphorylated inositol polyphosphates, also referred to as inositol pyrophosphates, are important signaling molecules that regulate critical cellular activities in many eukaryotic organisms, such as membrane trafficking, telomere maintenance, ribosome biogenesis, and apoptosis. In mammals and fungi, two distinct classes of inositol phosphate kinases mediate biosynthesis of inositol pyrophosphates: Kcs1/IP6K- and Vip1/PPIP5K-like proteins. Here, we report that PPIP5K homologs are widely distributed in plants and that Arabidopsis thaliana VIH1 and VIH2 are functional PPIP5K enzymes. We show a specific induction of inositol pyrophosphate InsP8 by jasmonate and demonstrate that steady state and jasmonate-induced pools of InsP8 in Arabidopsis seedlings depend on VIH2. We identify a role of VIH2 in regulating jasmonate perception and plant defenses against herbivorous insects and necrotrophic fungi. In silico docking experiments and radioligand binding-based reconstitution assays show high-affinity binding of inositol pyrophosphates to the F-box protein COI1-JAZ jasmonate coreceptor complex and suggest that coincidence detection of jasmonate and InsP8 by COI1-JAZ is a critical component in jasmonate-regulated defenses.

Indexed as

ArabidopsisArabidopsis ProteinsCyclopentanesGene Expression Regulation, PlantInositol PhosphatesOxylipinsArabidopsis ProteinsCyclopentanesInositol Phosphatesjasmonic acidOxylipins

Identifiers

PMID25901085
PMCPMC4558690
OpenAlexW2164269498

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.