Evidence map›Paper›PMID 25900776›Full record

ArticleProteins2015

Induced conformational change in human IL-4 upon binding of a signal-neutralizing DARPin.

Galina Obmolova, Alexey Teplyakov, Thomas J Malia, Edward Keough, Jinquan Luo, Raymond Sweet, Steven A Jacobs, Fang Yi, Randi Hippensteel, Karyn T O'Neil and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Proteins, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 98% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 7 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 2 countries.

Galina ObmolovaJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Alexey TeplyakovJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Thomas J MaliaJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Edward KeoughJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Jinquan LuoJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Raymond SweetJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Steven A JacobsJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Fang YiJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Randi HippensteelJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Karyn T O'NeilJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Gary L GillilandJanssen Research & Development, LLC, Biotechnology Center of Excellence, Spring House, Pennsylvania, 19477.
Janssen (Switzerland) · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The crystal structure of DARPin 44C12V5 that neutralizes IL-4 signaling has been determined alone and bound to human IL-4. A significant conformational change occurs in the IL-4 upon DARPin binding. The DARPin binds to the face of IL-4 formed by the A and C α-helices. The structure of the DARPin remains virtually unchanged. The conformational changes in IL-4 include a reorientation of the C-helix Trp91 side chain and repositioning of CD-loop residue Leu96. Both side chains move by >9 Å, becoming buried in the central hydrophobic region of the IL-4:DARPin interface. This hydrophobic region is surrounded by a ring of hydrophilic interactions comprised of hydrogen bonds and salt bridges and represents a classical "hotspot." The structures also reveal how the DARPin neutralizes IL-4 signaling. Comparing the IL-4:DARPin complex structure with the structures of IL-4 bound to its receptors (Hage et al., Cell 1999; 97, 271-281; La Porte et al., Cell 2008, 132, 259-272), it is found that the DARPin binds to the same IL-4 face that interacts with the junction of the D1 and D2 domains of the IL-4Rα receptors. Signaling is blocked since IL-4 cannot bind to this receptor, which it must do first before initiating a productive receptor complex with either the IL-13α1 or the γc receptor.

Indexed as

Ankyrin RepeatHumansInterleukin-4Models, MolecularProtein ConformationRecombinant ProteinsSignal TransductionIL4 protein, humanInterleukin-4Recombinant Proteinsalternative scaffoldDARPinIL-4:DARPin complexx-ray structure

Identifiers

PMID25900776
PMCPMC5029753
OpenAlexW1576070482

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.