Evidence map›Paper›PMID 25899605›Full record

ArticleDrug safety2015

Comparison of statistical signal detection methods within and across spontaneous reporting databases.

Gianmario Candore, Kristina Juhlin, Katrin Manlik, Bharat Thakrar, Naashika Quarcoo, Suzie Seabroke, Antoni Wisniewski, Jim Slattery

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Drug safety, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed.

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28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Gianmario CandoreEuropean Medicines Agency, 7 Westferry Circus, Canary Wharf, London, E14 4HB, UK.
Kristina Juhlin
Katrin Manlik
Bharat Thakrar
Naashika Quarcoo
Suzie Seabroke
Antoni Wisniewski
Jim Slattery

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMost pharmacovigilance departments maintain a system to identify adverse drug reactions (ADRs) through analysis of spontaneous reports. The signal detection algorithms (SDAs) and the nature of the reporting databases vary between operators and it is unclear whether any algorithm can be expected to provide good performance in a wide range of environments.

objectiveThe objective of this study was to compare the performance of commonly used algorithms across spontaneous reporting databases operated by pharmaceutical companies and national and international pharmacovigilance organisations.

methods220 products were chosen and a reference set of ADRs was compiled. Within four company, one national and two international databases, 15 SDAs based on five disproportionality methods were tested. Signals of disproportionate reporting (SDRs) were calculated at monthly intervals and classified by comparison with the reference set. These results were summarised as sensitivity and precision for each algorithm in each database.

resultsDifferent algorithms performed differently between databases but no method dominated all others. Performance was strongly dependent on the thresholds used to define a statistical signal. However, the different disproportionality statistics did not influence the achievable performance. The relative performance of two algorithms was similar in different databases. Over the lifetime of a product there is a reduction in precision for any method.

conclusionsIn designing signal detection systems, careful consideration should be given to the criteria that are used to define an SDR. The choice of disproportionality statistic does not appreciably affect the achievable range of signal detection performance and so this can primarily be based on ease of implementation, interpretation and minimisation of computing resources. The changes in sensitivity and precision obtainable by replacing one algorithm with another are predictable. However, the absolute performance of a method is specific to the database and is best assessed directly on that database. New methods may be required to gain appreciable improvements.

Indexed as

AlgorithmsPharmacovigilanceAdverse Drug Reaction Reporting SystemsDatabases, FactualDrug-Related Side Effects and Adverse ReactionsHumansSensitivity and Specificity

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.