Evidence map›Paper›PMID 25899068›Full record

ArticleJournal of integrative plant biology2015

Characterization of tub4(P287L) , a β-tubulin mutant, revealed new aspects of microtubule regulation in shade.

Jie Yu, Hong Qiu, Xin Liu, Meiling Wang, Yongli Gao, Joanne Chory, Yi Tao

Open access · greenAbstract read
In one paragraph

Article in Journal of integrative plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
6.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Hormonal Regulation in Shade Avoidance.Frontiers in plant science · 2017
    Review
  7. Article
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Jie YuSchool of Life Sciences, Xiamen Plant Genetics Key Laboratory, Xiamen University, Xiamen, 361102, China.
Hong QiuSchool of Life Sciences, Xiamen Plant Genetics Key Laboratory, Xiamen University, Xiamen, 361102, China.
Xin LiuSchool of Life Sciences, Xiamen Plant Genetics Key Laboratory, Xiamen University, Xiamen, 361102, China.
Meiling WangSchool of Life Sciences, Xiamen Plant Genetics Key Laboratory, Xiamen University, Xiamen, 361102, China.
Yongli GaoSchool of Life Sciences, Xiamen Plant Genetics Key Laboratory, Xiamen University, Xiamen, 361102, China.
Joanne ChoryHoward Hughes Medical Institute, The Salk Institute for Biological Studies, La Jolla, California, 92037, USA.
Yi TaoSchool of Life Sciences, Xiamen Plant Genetics Key Laboratory, Xiamen University, Xiamen, 361102, China.
Xiamen University · CNSalk Institute for Biological Studies · US

Funding

INITIAL EVENTS IN PHOTORECEPTOR SIGNALINGR01GM052413 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI CHORY, JOANNE · 1995 to 2016
$5.4M
Howard Hughes Medical InstituteNIGMS NIH HHS 5 RO1GM52413NIGMS NIH HHS R01 GM052413
6 · The paper itself

Abstract

When sun plants, such as Arabidopsis thaliana, are under canopy shade, elongation of stems/petioles will be induced as one of the most prominent responses. Plant hormones mediate the elongation growth. However, how environmental and hormonal signals are translated into cell expansion activity that leads to the elongation growth remains elusive. Through forward genetic study, we identified shade avoidance2 (sav2) mutant, which contains a P287L mutation in β-TUBULIN 4. Cortical microtubules (cMTs) play a key role in anisotropic cell growth. Hypocotyls of sav2 are wild type-like in white light, but are short and highly swollen in shade and dark. We showed that shade not only induces cMT rearrangement, but also affects cMT stability and dynamics of plus ends. Even though auxin and brassinosteroids are required for shade-induced hypocotyl elongation, they had little effect on shade-induced rearrangement of cMTs. Blocking auxin transport suppressed dark phenotypes of sav2, while overexpressing EB1b-GFP, a microtubule plus-end binding protein, rescued sav2 in both shade and dark, suggesting that tub4(P287L) represents a unique type of tubulin mutation that does not affect cMT function in supporting cell elongation, but may affect the ability of cMTs to respond properly to growth promoting stimuli.

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsMicrotubulesPlant Growth RegulatorsTubulinArabidopsis ProteinsPlant Growth RegulatorsTubulinArabidopsismicrotubulesplant hormonesshade

Identifiers

PMID25899068
PMCPMC4779058
OpenAlexW1546721979

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.