Evidence map›Paper›PMID 25897173›Full record

ArticleThe Journal of experimental medicine2015

The transcription factor lymphoid enhancer factor 1 controls invariant natural killer T cell expansion and Th2-type effector differentiation.

Tiffany Carr, Veena Krishnamoorthy, Shuyang Yu, Hai-Hui Xue, Barbara L Kee, Mihalis Verykokakis

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Genetic Analysis of iNKT Cell Development and Function.Methods in molecular biology (Clifton, N.J.) · 2021
    Review
  12. TargetingFrontiers in immunology · 2021
    Article
  13. Article
  14. Article
  15. Review
  16. YY1Scientific reports · 2020
    Article
  17. Article
  18. Article
  19. CD24Immune network · 2019
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tiffany CarrCommittee on Immunology, Committee on Molecular Pathogenesis and Molecular Medicine, and Department of Pathology, The University of Chicago, Chicago, IL 60637.
Veena KrishnamoorthyCommittee on Immunology, Committee on Molecular Pathogenesis and Molecular Medicine, and Department of Pathology, The University of Chicago, Chicago, IL 60637.
Shuyang YuDepartment of Microbiology, University of Iowa, Iowa City, IA 52242.
Hai-Hui XueDepartment of Microbiology, University of Iowa, Iowa City, IA 52242.
Barbara L KeeCommittee on Immunology, Committee on Molecular Pathogenesis and Molecular Medicine, and Department of Pathology, The University of Chicago, Chicago, IL 60637 Committee on Immunology, Committee on Molecular Pathogenesis and Molecular Medicine, and Department of Pathology, The University of Chicago, Chicago, IL 60637 Committee on Immunology, Committee on Molecular Pathogenesis and Molecular Medicine, and Department of Pathology, The University of Chicago, Chicago, IL 60637 bkee@bsd.uchicago.edu mvery@uchicago.edu.
Mihalis VerykokakisCommittee on Immunology, Committee on Molecular Pathogenesis and Molecular Medicine, and Department of Pathology, The University of Chicago, Chicago, IL 60637 Committee on Immunology, Committee on Molecular Pathogenesis and Molecular Medicine, and Department of Pathology, The University of Chicago, Chicago, IL 60637 bkee@bsd.uchicago.edu mvery@uchicago.edu.

Funding

INTERDISCIPLINARY TRAINING PROGRAM IN IMMUNOLOGYT32AI007090 · NIAID · UNIVERSITY OF CHICAGO · PI Peter Aidan Savage · 1985 to 2026
$11.7M
Transcriptional Control of Natural Killer Cell DevelopmentR01AI106352 · NIAID · UNIVERSITY OF CHICAGO · PI KEE, BARBARA L. · 2014 to 2023
$4.6M
Regulation of Lymphocyte Development by HLH ProteinsR01CA099978 · NCI · UNIVERSITY OF CHICAGO · PI KEE, BARBARA L. · 2003 to 2012
$3.2M
Mechanisms of Lymphocyte Gene Regulation by E2A and Notch1R01AI079213 · NIAID · UNIVERSITY OF CHICAGO · PI KEE, BARBARA L. · 2009 to 2010
$761k
Decoding TCF1-controlled transcriptional program that promotes memory T cell fateR21AI105351 · NIAID · UNIVERSITY OF IOWA · PI XUE, HAI-HUI · 2013 to 2014
$378k
E and Id protein function in natural killer T cell differentiationR56AI104303 · NIAID · UNIVERSITY OF CHICAGO · PI KEE, BARBARA L. · 2013 to 2013
$366k
NCI NIH HHS R01 CA099978NIAID NIH HHS R01 AI079213NIAID NIH HHS R01 AI105351NIAID NIH HHS R01 AI106352NIAID NIH HHS R01 CA99978/AI106352NIAID NIH HHS R21 AI105351NIAID NIH HHS R56 AI104303NIAID NIH HHS T32 AI007090
6 · The paper itself

Abstract

Invariant natural killer T cells (iNKT cells) are innate-like T cells that rapidly produce cytokines that impact antimicrobial immune responses, asthma, and autoimmunity. These cells acquire multiple effector fates during their thymic development that parallel those of CD4(+) T helper cells. The number of Th2-type effector iNKT cells is variable in different strains of mice, and their number impacts CD8 T, dendritic, and B cell function. Here we demonstrate a unique function for the transcription factor lymphoid enhancer factor 1 (LEF1) in the postselection expansion of iNKT cells through a direct induction of the CD127 component of the receptor for interleukin-7 (IL-7) and the transcription factor c-myc. LEF1 also directly augments expression of the effector fate-specifying transcription factor GATA3, thus promoting the development of Th2-like effector iNKT cells that produce IL-4, including those that also produce interferon-γ. Our data reveal LEF1 as a central regulator of iNKT cell number and Th2-type effector differentiation.

Indexed as

AnimalsCD8-Positive T-LymphocytesCell DifferentiationInterleukin-4Interleukin-7Interleukin-7 Receptor alpha SubunitLymphoid Enhancer-Binding Factor 1MiceMice, TransgenicNatural Killer T-CellsTh2 CellsInterleukin-4Interleukin-7Interleukin-7 Receptor alpha SubunitLef1 protein, mouseLymphoid Enhancer-Binding Factor 1

Identifiers

PMID25897173
PMCPMC4419352

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.