Evidence map›Paper›PMID 25897081›Full record

ArticleThe Journal of biological chemistry2015

Protein-tyrosine Phosphatase and Kinase Specificity in Regulation of SRC and Breast Tumor Kinase.

Gaofeng Fan, Saadat Aleem, Ming Yang, W Todd Miller, Nicholas K Tonks

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Targeting protein tyrosine kinase 6 in cancer.Biochimica et biophysica acta. Reviews on cancer · 2020
    Review
  14. Structure, Function, and Regulation of the SRMS Tyrosine Kinase.International journal of molecular sciences · 2020
    Review
  15. Nuclear Functions of the Tyrosine Kinase Src.International journal of molecular sciences · 2020
    Review
  16. Study on the Antibreast Cancer Mechanism and Bioactive Components ofEvidence-based complementary and alternative medicine : eCAM · 2020
    Article
  17. Protein tyrosine kinase 6 signaling in prostate cancer.American journal of clinical and experimental urology · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Gaofeng FanFrom the Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724-2208 and.
Saadat Aleemthe Department of Physiology and Biophysics, Stony Brook University, Stony Brook, New York 11794-8661.
Ming YangFrom the Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724-2208 and.
W Todd Millerthe Department of Physiology and Biophysics, Stony Brook University, Stony Brook, New York 11794-8661 Todd.Miller@stonybrook.edu.
Nicholas K TonksFrom the Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724-2208 and tonks@cshl.edu.
Cold Spring Harbor Laboratory · USStony Brook University · US

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
PROTEIN TYROSINE DEPHOSPHORYLATION &SIGNAL TRANSDUCTIONR01CA053840 · NCI · COLD SPRING HARBOR LABORATORY · PI TONKS, NICHOLAS K · 1991 to 2025
$11.8M
Basic Science Training Program in Drug Abuse ResearchT32DA007290 · NIDA · YALE UNIVERSITY · PI SELF, DAVID W · 1992 to 2017
$6.7M
Protein Tyrosine Dephosphorylation &signal TransductionR37CA053840 · NCI · COLD SPRING HARBOR LABORATORY · PI TONKS, NICHOLAS K · 2001 to 2008
$5.2M
SUSTRATE SPECIFICITY OF NONRECEPTOR TYROSINE KINASER01CA058530 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI MILLER, W TODD · 1999 to 2018
$3.7M
The Role of Cdk5 in AddictionR01DA016672 · NIDA · UT SOUTHWESTERN MEDICAL CENTER · PI BIBB, JAMES A · 2003 to 2010
$2.5M
Novel Signal Transduction Mechanisms in Learning and MemoryR01MH083711 · NIMH · UT SOUTHWESTERN MEDICAL CENTER · PI BIBB, JAMES A · 2010 to 2014
$2.0M
The Role of Cdk5 in StrokeR01NS073855 · NINDS · UT SOUTHWESTERN MEDICAL CENTER · PI BIBB, JAMES A · 2012 to 2017
$1.7M
The Regulation of Dopamine Neurotransmission by CDK5R01MH079710 · NIMH · UT SOUTHWESTERN MEDICAL CENTER · PI BIBB, JAMES A · 2008 to 2011
$1.7M
NMDA RECEPTOR REGULATION IN ADDICTIONR01DA033485 · NIDA · UT SOUTHWESTERN MEDICAL CENTER · PI BIBB, JAMES A · 2012 to 2016
$1.6M
NCI NIH HHS P30 CA045508NCI NIH HHS R01 CA053840NCI NIH HHS R01 CA058530NCI NIH HHS R37 CA053840NIDA NIH HHS DA016672NIDA NIH HHS DA033485NIDA NIH HHS T32DA007290NIMH NIH HHS MH083711NIMH NIH HHS MH79710NINDS NIH HHS NS073855
6 · The paper itself

Abstract

Despite significant evidence to the contrary, the view that phosphatases are "nonspecific" still pervades the field. Systems biology approaches to defining how signal transduction pathways are integrated at the level of whole organisms also often downplay the contribution of phosphatases, defining them as "erasers" that serve merely to restore the system to its basal state. Here, we present a study that counteracts the idea of "nonspecific phosphatases." We have characterized two structurally similar and functionally related kinases, BRK and SRC, which are regulated by combinations of activating autophosphorylation and inhibitory C-terminal sites of tyrosine phosphorylation. We demonstrated specificity at the level of the kinases in that SRMS phosphorylated the C terminus of BRK, but not SRC; in contrast, CSK is the kinase responsible for C-terminal phosphorylation of SRC, but not BRK. For the phosphatases, we observed that RNAi-mediated suppression of PTP1B resulted in opposing effects on the activity of BRK and SRC and have defined the mechanisms underlying this specificity. PTP1B inhibited BRK by directly dephosphorylating the Tyr-342 autophosphorylation site. In contrast, PTP1B potentiated SRC activity, but not by dephosphorylating SRC itself directly; instead, PTP1B regulated the interaction between CBP/PAG and CSK. SRC associated with, and phosphorylated, the transmembrane protein CBP/PAG at Tyr-317, resulting in CSK recruitment. We identified PAG as a substrate of PTP1B, and dephosphorylation abolished recruitment of the inhibitory kinase CSK. Overall, these findings illustrate how the combinatorial effects of PTKs and PTPs may be integrated to regulate signaling, with both classes of enzymes displaying exquisite specificity.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid MotifsAnimalsBreast NeoplasmsCSK Tyrosine-Protein KinaseFemaleHumansMembrane ProteinsMiceMice, KnockoutNeoplasm ProteinsPhosphorylationProtein-Tyrosine KinasesProtein Tyrosine Phosphatase, Non-Receptor Type 1src-Family KinasesAdaptor Proteins, Signal TransducingCSK protein, humanCSK Tyrosine-Protein KinaseMembrane ProteinsNeoplasm ProteinsPAG1 protein, humanProtein-Tyrosine KinasesProtein Tyrosine Phosphatase, Non-Receptor Type 1PTK6 protein, humanPTPN1 protein, humansrc-Family KinasesSRMS protein, humanphosphorylationphosphotyrosinePTP1B, SRC, BRK, CSK, and CBP/PAGSrctyrosine-protein kinase (tyrosine kinase)tyrosine-protein phosphatase (tyrosine phosphatase)

Identifiers

PMID25897081
PMCPMC4481198
OpenAlexW1521732454

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.