Evidence map›Paper›PMID 25896535›Full record

ArticleThe pharmacogenomics journal2016

Replication of PTPRC as genetic biomarker of response to TNF inhibitors in patients with rheumatoid arthritis.

A Ferreiro-Iglesias, A Montes, E Perez-Pampin, J D Cañete, E Raya, C Magro-Checa, Y Vasilopoulos, T Sarafidou, R Caliz, M A Ferrer and 18 more

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In one paragraph

Article in The pharmacogenomics journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 5 pooled it
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 5 syntheses or guidelines pooled it, 47 citations in OpenAlex.

  1. Pooled it
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  6. Article
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  8. Towards Personalized Medicine in Rheumatoid Arthritis.Open access rheumatology : research and reviews · 2024
    Review
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  19. Bioinformatics Analysis and Identification of Genes and Molecular Pathways Involved in Synovial Inflammation in Rheumatoid Arthritis.Medical science monitor : international medical journal of experimental and clinical research · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 18 institutions in 2 countries.

A Ferreiro-IglesiasLaboratorio de Investigacion 10 and Rheumatology Unit, Instituto de Investigacion Sanitaria-Hospital Clinico Universitario de Santiago, Santiago de Compostela, Spain.
A MontesLaboratorio de Investigacion 10 and Rheumatology Unit, Instituto de Investigacion Sanitaria-Hospital Clinico Universitario de Santiago, Santiago de Compostela, Spain.
E Perez-PampinLaboratorio de Investigacion 10 and Rheumatology Unit, Instituto de Investigacion Sanitaria-Hospital Clinico Universitario de Santiago, Santiago de Compostela, Spain.
J D CañeteRheumatology Unit, Hospital Clinic, IDIBAPS, Barcelona, Spain.
E RayaDepartment of Rheumatology, Hospital Clínico San Cecilio, Granada, Spain.
C Magro-ChecaDepartment of Rheumatology, Hospital Clínico San Cecilio, Granada, Spain.
Y VasilopoulosDepartment of Biochemistry and Biotechnology, University of Thessaly, Larissa, Greece.
T SarafidouDepartment of Biochemistry and Biotechnology, University of Thessaly, Larissa, Greece.
R CalizRheumatology Unit, Hospital Universitario Virgen de las Nieves, Granada, Spain.
M A FerrerRheumatology Unit, Hospital Universitario Virgen de las Nieves, Granada, Spain.
B JovenReumatology Department, Hospital 12 de Octubre, Madrid, Spain.
P CarreiraReumatology Department, Hospital 12 de Octubre, Madrid, Spain.
A BalsaDepartment of Rheumatology and Institute for Health Research (IdiPAZ), University Hospital La Paz. Madrid, Spain.
D Pascual-SalcedoImmunology Unit, Instituto de Investigación Hospital Universitario La Paz, Hospital Universitario La Paz, Madrid, Spain.
F J BlancoServicio de Reumatología. Instituto de Investigación Biomédica de A Coruña (INIBIC), Complexo Hospitalario Universitario de A Coruña (CHUAC), Sergas, Universidade da Coruña (UDC), A Coruña, Spain.
M J Moreno-RamosDepartment of Rheumatology, Hospital Virgen de la Arrixaca, Murcia, Spain.
A Fernández-NebroUGC de Reumatología, Instituto deInvestigación Biomédica de Málaga (IBIMA), HRU de Málaga, Universidad de Málaga, Málaga, Spain.
M C OrdóñezUGC de Reumatología, Instituto deInvestigación Biomédica de Málaga (IBIMA), HRU de Málaga, Universidad de Málaga, Málaga, Spain.
J J Alegre-SanchoDepartment of Rheumatology, Hospital Doctor Peset, Valencia, Spain.
J NarváezDepartment of Rheumatology, Hospital Universitario de Bellvitge, Barcelona, Spain.
F Navarro-SarabiaRheumatology Unit, Hospital Universitario Virgen Macarena, Sevilla, Spain.
V MoreiraRheumatology Unit, Hospital Universitario Virgen Macarena, Sevilla, Spain.
L ValorRheumatology Unit, Hospital General Universitario Gregorio Marañón, Madrid, Spain.
R García-PortalesDepartment of Rheumatology, Hospital Virgen de la Victoria, Málaga, Spain.
A MarquezInstituto de Parasitología y Biomedicina López-Neyra, CSIC, Granada, Spain.
J MartinInstituto de Parasitología y Biomedicina López-Neyra, CSIC, Granada, Spain.
J J Gómez-ReinoLaboratorio de Investigacion 10 and Rheumatology Unit, Instituto de Investigacion Sanitaria-Hospital Clinico Universitario de Santiago, Santiago de Compostela, Spain.
A GonzalezLaboratorio de Investigacion 10 and Rheumatology Unit, Instituto de Investigacion Sanitaria-Hospital Clinico Universitario de Santiago, Santiago de Compostela, Spain.ORCID http://orcid.org/0000-0002-2624-0606
Instituto de Investigación Sanitaria de Santiago · ESHospital Universitario Virgen de las Nieves · ESHospital Universitario Virgen Macarena · ESInstituto de Investigación Biomédica de Málaga · ESInstituto de Investigación Biosanitaria de Granada · ESInstituto de Parasitología y Biomedicina "López - Neyra" · ESResearch Institute Hospital 12 de Octubre · ESUniversity of Thessaly · GRBellvitge University Hospital · ESHospital Clínic de Barcelona · ESHospital Clínico Universitario Virgen de la Victoria · ESHospital General Universitario Gregorio Marañón · ESHospital La Paz Institute for Health Research · ESHospital Universitario Doctor Peset · ESHospital Universitario La Paz · ESHospital Universitario Virgen de la Arrixaca · ESUniversidade da Coruña · ESUniversidade de Santiago de Compostela · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic biomarkers could be useful for orienting treatment of patients with rheumatoid arthritis (RA), but none has been convincingly validated yet. Putative biomarkers include 14 single nucleotide polymorphisms that have shown association with response to TNF inhibitors (TNFi) in candidate gene studies and that we assayed here in 755 RA patients. Three of them, in the PTPRC, IL10 and CHUK genes, were significantly associated with response to TNFi. The most significant result was obtained with rs10919563 in PTPRC, which is a confirmed RA susceptibility locus. Its RA risk allele was associated with improved response (B=0.33, P=0.006). This is the second independent replication of this biomarker (P=9.08 × 10(-8) in the combined 3003 RA patients). In this way, PTPRC has become the most replicated genetic biomarker of response to TNFi. In addition, the positive but weaker replication of IL10 and CHUK should stimulate further validation studies.

Indexed as

AdalimumabAntirheumatic AgentsArthritis, RheumatoidFemaleGenetic Association StudiesGenetic MarkersHumansI-kappa B KinaseInfliximabInterleukin-10Leukocyte Common AntigensMaleMiddle AgedPolymorphism, Single NucleotideRiskTumor Necrosis Factor-alphaAdalimumabAntirheumatic AgentsCHUK protein, humanGenetic MarkersI-kappa B KinaseInfliximabInterleukin-10Leukocyte Common AntigensPTPRC protein, humanTumor Necrosis Factor-alpha

Identifiers

PMID25896535
OpenAlexW1981398901

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.