Evidence map›Paper›PMID 25895133›Full record

ArticleOncotarget2015

Inhibition of mutant IDH1 decreases D-2-HG levels without affecting tumorigenic properties of chondrosarcoma cell lines.

Johnny Suijker, Jan Oosting, Annemarie Koornneef, Eduard A Struys, Gajja S Salomons, Frank G Schaap, Cathelijn J F Waaijer, Pauline M Wijers-Koster, Inge H Briaire-de Bruijn, Lizette Haazen and 6 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 103 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
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  7. Review
  8. Cancers · 2023
    Review
  9. Article
  10. Review
  11. Epigenetic Abnormalities in Chondrosarcoma.International journal of molecular sciences · 2023
    Review
  12. Article
  13. Diagnostics (Basel, Switzerland) · 2022
    Article
  14. Distinct Roles of Glutamine Metabolism in Benign and Malignant Cartilage Tumors With IDH Mutations.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2022
    Article
  15. Therapeutic Targets and Emerging Treatments in Advanced Chondrosarcoma.International journal of molecular sciences · 2022
    Review
  16. Review
  17. Review
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Johnny SuijkerDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Jan OostingDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Annemarie KoornneefDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Eduard A StruysMetabolic Unit, Department of Clinical Chemistry, VU University Medical Center, Neuroscience Campus Amsterdam, Amsterdam, The Netherlands.
Gajja S SalomonsMetabolic Unit, Department of Clinical Chemistry, VU University Medical Center, Neuroscience Campus Amsterdam, Amsterdam, The Netherlands.
Frank G SchaapDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Cathelijn J F WaaijerDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Pauline M Wijers-KosterDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Inge H Briaire-de BruijnDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Lizette HaazenDivision of Toxicology, Leiden Academic Center for Drug Research, Leiden University, Leiden, The Netherlands.
Scott M RiesterDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, NY, USA.
Amel DudakovicDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, NY, USA.
Erik DanenDivision of Toxicology, Leiden Academic Center for Drug Research, Leiden University, Leiden, The Netherlands.
Anne-Marie Cleton-JansenDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Andre J van WijnenDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, NY, USA.
Judith V M G BovéeDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Leiden University Medical Center · NLMayo Clinic · USAmsterdam Neuroscience · NLCentre for Human Drug Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations in isocitrate dehydrogenase 1 (IDH1) and IDH2 are found in a subset of benign and malignant cartilage tumors, gliomas and leukaemias. The mutant enzyme causes the production of D-2-hydroxyglutarate (D-2-HG), affecting CpG island and histone methylation. While mutations in IDH1/2 are early events in benign cartilage tumors, we evaluated whether these mutations play a role in malignant chondrosarcomas. Compared to IDH1/2 wildtype cell lines, chondrosarcoma cell lines harboring an endogenous IDH1 (n=3) or IDH2 mutation (n=2) showed up to a 100-fold increase in intracellular and extracellular D-2-HG levels. Specific inhibition of mutant IDH1 using AGI-5198 decreased levels of D-2-HG in a dose dependent manner. After 72 hours of treatment one out of three mutant IDH1 cell lines showed a moderate decrease in viability , while D-2-HG levels decreased >90%. Likewise, prolonged treatment (up to 20 passages) did not affect proliferation and migration. Furthermore, global gene expression, CpG island methylation as well as histone H3K4, -9, and -27 trimethylation levels remained unchanged. Thus, while IDH1/2 mutations cause enchondroma, malignant progression towards central chondrosarcoma renders chondrosarcoma growth independent of these mutations. Thus, monotherapy based on inhibition of mutant IDH1 appears insufficient for treatment of inoperable or metastasized chondrosarcoma patients.

Indexed as

Blotting, WesternBone NeoplasmsCell Line, TumorChondrosarcomaChromatography, LiquidDNA Mutational AnalysisGlutaratesHumansIsocitrate DehydrogenaseMutationReal-Time Polymerase Chain ReactionTandem Mass Spectrometryalpha-hydroxyglutarateGlutaratesIDH1 protein, humanIDH2 protein, humanIsocitrate DehydrogenaseAGI-5198chondrosarcomad-2-hydroxyglutarateisocitrate dehydrogenasesarcoma

Identifiers

PMID25895133
PMCPMC4494954
OpenAlexW1934866169

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.