Evidence map›Paper›PMID 25893634›Full record

ArticleOncogenesis2015

Prediction of recurrence-free survival using a protein expression-based risk classifier for head and neck cancer.

S S Chauhan, J Kaur, M Kumar, A Matta, G Srivastava, A Alyass, J Assi, I Leong, C MacMillan, I Witterick and 7 more

Open access · goldAbstract read
In one paragraph

Article in Oncogenesis, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 49 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  7. Article
  8. LINC00467: an oncogenic long noncoding RNA.Cancer cell international · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Current Insights into Oral Cancer Diagnostics.Diagnostics (Basel, Switzerland) · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

S S ChauhanDepartment of Biochemistry, All India Institute of Medical Sciences, New Delhi, India.
J Kaur1] Department of Biochemistry, All India Institute of Medical Sciences, New Delhi, India [2] Alex and Simona Shnaider Laboratory in Molecular Oncology, Mount Sinai Hospital, Toronto, Ontario, Canada.
M KumarDepartment of Biochemistry, All India Institute of Medical Sciences, New Delhi, India.
A MattaAlex and Simona Shnaider Laboratory in Molecular Oncology, Mount Sinai Hospital, Toronto, Ontario, Canada.
G SrivastavaAlex and Simona Shnaider Laboratory in Molecular Oncology, Mount Sinai Hospital, Toronto, Ontario, Canada.
A Alyass1] Alex and Simona Shnaider Laboratory in Molecular Oncology, Mount Sinai Hospital, Toronto, Ontario, Canada [2] Department of Clinical Epidemiology and Biostatistics, McMaster University, Hamilton, Ontario, Canada.
J AssiAlex and Simona Shnaider Laboratory in Molecular Oncology, Mount Sinai Hospital, Toronto, Ontario, Canada.
I Leong1] Department of Pathology and Laboratory Medicine, Mount Sinai Hospital, Joseph & Wolf Lebovic Health Complex, Toronto, Ontario, Canada [2] Department of Oral Pathology and Oral Medicine, Faculty of Dentistry, University of Toronto, Toronto, Ontario, Canada.
C MacMillanDepartment of Pathology and Laboratory Medicine, Mount Sinai Hospital, Joseph & Wolf Lebovic Health Complex, Toronto, Ontario, Canada.
I Witterick1] Department of Otolaryngology - Head and Neck Surgery, Joseph and Mildred Sonshine Family Centre for Head and Neck Diseases, Mount Sinai Hospital, Toronto, Ontario, Canada [2] Department of Otolaryngology - Head and Neck Surgery, University of Toronto, Toronto, Ontario, Canada.
T J Colgan1] Department of Pathology and Laboratory Medicine, Mount Sinai Hospital, Joseph & Wolf Lebovic Health Complex, Toronto, Ontario, Canada [2] Department of Oral Pathology and Oral Medicine, Faculty of Dentistry, University of Toronto, Toronto, Ontario, Canada.
N K ShuklaDepartment of Surgery, Dr. B.R.A. Institute Rotary Cancer Hospital, All India Institute of Medical Sciences, New Delhi, India.
A ThakarDepartment of Otorhinolaryngology, All India Institute of Medical Sciences, New Delhi, India.
M C SharmaDepartment of Pathology, All India Institute of Medical Sciences, New Delhi, India.
K W M SiuDepartment of Chemistry and Biochemistry, University of Windsor, Windsor, Ontario, Canada.
P G Walfish1] Alex and Simona Shnaider Laboratory in Molecular Oncology, Mount Sinai Hospital, Toronto, Ontario, Canada [2] Department of Pathology and Laboratory Medicine, Mount Sinai Hospital, Joseph & Wolf Lebovic Health Complex, Toronto, Ontario, Canada [3] Department of Oral Pathology and Oral Medicine, Faculty of Dentistry, University of Toronto, Toronto, Ontario, Canada [4] Department of Otolaryngology - Head and Neck Surgery, Joseph and Mildred Sonshine Family Centre for Head and Neck Diseases, Mount Sinai Hospital, Toronto, Ontario, Canada [5] Department of Otolaryngology - Head and Neck Surgery, University of Toronto, Toronto, Ontario, Canada [6] Endocrine Division, Department of Medicine, Mount Sinai Hospital and University of Toronto, Toronto, Ontario, Canada.
R Ralhan1] Alex and Simona Shnaider Laboratory in Molecular Oncology, Mount Sinai Hospital, Toronto, Ontario, Canada [2] Department of Pathology and Laboratory Medicine, Mount Sinai Hospital, Joseph & Wolf Lebovic Health Complex, Toronto, Ontario, Canada [3] Department of Oral Pathology and Oral Medicine, Faculty of Dentistry, University of Toronto, Toronto, Ontario, Canada [4] Department of Otolaryngology - Head and Neck Surgery, Joseph and Mildred Sonshine Family Centre for Head and Neck Diseases, Mount Sinai Hospital, Toronto, Ontario, Canada [5] Department of Otolaryngology - Head and Neck Surgery, University of Toronto, Toronto, Ontario, Canada.
Mount Sinai Hospital · CAAll India Institute of Medical Sciences · INDR. B.R.A. Institute Rotary Cancer Hospital · INUniversity of Windsor · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Loco-regional recurrence in 50% of oral squamous cell carcinoma (OSCC) patients poses major challenge for oncologists. Lack of biomarkers that can predict disease aggressiveness and recurrence risk makes the scenario more dismal. On the basis of our earlier global proteomic analyses we identified five differentially expressed proteins in OSCC. This study aimed to develop protein biomarkers-based prognostic risk prediction model for OSCC. Sub-cellular expression of five proteins, S100A7, heterogeneous nuclear ribonucleoproteinK (hnRNPK), prothymosin α (PTMA), 14-3-3ζ and 14-3-3σ was analyzed by immunohistochemistry in test set (282 Indian OSCCs and 209 normal tissues), correlated with clinic-pathological parameters and clinical outcome over 12 years to develop a risk model for prediction of recurrence-free survival. This risk classifier was externally validated in 135 Canadian OSCC and 96 normal tissues. Biomarker signature score based on PTMA, S100A7 and hnRNPK was associated with recurrence free survival of OSCC patients (hazard ratio=1.11; 95% confidence interval 1.08, 1.13, P<0.001, optimism-corrected c-statistic=0.69) independent of clinical parameters. Biomarker signature score stratified OSCC patients into high- and low-risk groups with significant difference for disease recurrence. The high-risk group had median survival 14 months, and 3-year survival rate of 30%, whereas low-risk group survival probability did not reach 50%, and had 3-year survival rate of 71%. As a powerful predictor of 3-year recurrence-free survival in OSCC patients, the newly developed biomarkers panel risk classifier will facilitate patient counseling for personalized treatment.

Identifiers

PMID25893634
PMCPMC4491610
OpenAlexW2016411082

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.