Evidence map›Paper›PMID 25893467›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015

The different effects of starch synthase IIa mutations or variation on endosperm amylose content of barley, wheat and rice are determined by the distribution of starch synthase I and starch branching enzyme IIb between the starch granule and amyloplast stroma.

Jixun Luo, Regina Ahmed, Behjat Kosar-Hashemi, Oscar Larroque, Vito M Butardo, Greg J Tanner, Michelle L Colgrave, Narayana M Upadhyaya, Ian J Tetlow, Michael J Emes and 4 more

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Three Major Nucleotide Polymorphisms in theJournal of applied glycoscience · 2019
    Article
  10. Crop resistant starch and genetic improvement: a review of recent advances.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Review
  11. Article
  12. Article
  13. Article
  14. Bioinformatic andFrontiers in plant science · 2018
    Article
  15. Article
  16. Article
  17. Article
  18. Comparative Mapping and Candidate Gene Analysis ofFrontiers in plant science · 2017
    Article
  19. The impact of the SSIIaBreeding science · 2016
    Article
  20. Formation of starch in plant cells.Cellular and molecular life sciences : CMLS · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

Jixun LuoCSIRO Agriculture Flagship, GPO Box 1600, Canberra, ACT, 2601, Australia.
Regina Ahmed
Behjat Kosar-Hashemi
Oscar Larroque
Vito M Butardo
Greg J Tanner
Michelle L Colgrave
Narayana M Upadhyaya
Ian J Tetlow
Michael J Emes
Anthony Millar
Stephen A Jobling
Matthew K Morell
Zhongyi Li
Commonwealth Scientific and Industrial Research Organisation · AUUniversity of Guelph · CAAustralian National University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageThe distribution of starch synthase I and starch branching enzyme IIb between the starch granule and amyloplast stroma plays an important role in determining endosperm amylose content of cereal grains. Starch synthase IIa (SSIIa) catalyses the polymerisation of intermediate length glucan chains of amylopectin in the endosperm of cereals. Mutations of SSIIa genes in barley and wheat and inactive SSIIa variant in rice induce similar effects on the starch structure and the amylose content, but the severity of the phenotypes is different. This study compared the levels of transcripts and partitioning of proteins of starch synthase I (SSI) and starch branching enzyme IIb (SBEIIb) inside and outside the starch granules in the developing endosperms of these ssIIa mutants and inactive SSIIa variant. Pleiotropic effects on starch granule-bound proteins suggested that the different effects of SSIIa mutations on endosperm amylose content of barley, wheat and rice are determined by the distribution of SSI and SBEIIb between the starch granule and amyloplast stroma in cereals. Regulation of starch synthesis in ssIIa mutants and inactive SSIIa variant may be at post-translational level or the altered amylopectin structure deprives the affinity of SSI and SBEIIb to amylopectin.

Indexed as

1,4-alpha-Glucan Branching EnzymeAmyloseDNA, PlantEndospermGenetic PleiotropyGenotypeHordeumMutationOryzaPhenotypePlant ProteinsPlastidsStarch SynthaseTriticum1,4-alpha-Glucan Branching EnzymeAmyloseDNA, Plantgranule-bound starch synthase IPlant Proteinsstarch-branching enzyme IIbStarch Synthasestarch synthase II

Identifiers

PMID25893467
OpenAlexW1973780736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.