Evidence map›Paper›PMID 25893265›Full record

ArticlePediatric obesity2016

Influence of SNP*SNP interaction on BMI in European American adolescents: findings from the National Longitudinal Study of Adolescent Health.

K L Young, M Graff, K E North, A S Richardson, J P Bradfield, S F A Grant, L A Lange, E M Lange, K M Harris, P Gordon-Larsen

Open access · greenAbstract read
In one paragraph

Article in Pediatric obesity, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
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  4. Obesity ofDiabetes, metabolic syndrome and obesity : targets and therapy · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

K L YoungDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC, USA.ORCID http://orcid.org/0000-0003-0070-6145
M GraffDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC, USA.
K E NorthDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC, USA.
A S RichardsonCarolina Population Center, University of North Carolina, Chapel Hill, NC, USA.
J P BradfieldCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
S F A GrantDepartment of Pediatrics, Children's Hospital of Philadelphia, Research Institute, Philadelphia, PA, USA.
L A LangeCarolina Center for Genome Sciences, University of North Carolina, Chapel Hill, NC, USA.
E M LangeCarolina Center for Genome Sciences, University of North Carolina, Chapel Hill, NC, USA.
K M HarrisCarolina Population Center, University of North Carolina, Chapel Hill, NC, USA.
P Gordon-LarsenCarolina Population Center, University of North Carolina, Chapel Hill, NC, USA.
University of North Carolina at Chapel Hill · USChildren's Hospital of Philadelphia · US

Funding

Wave IV Data CollectionP01HD031921 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HARRIS, KATHLEEN MULLAN · 1994 to 2020
$86.1M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
Carolina Population CenterR24HD050924 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MORGAN, SAMUEL PHILIP · 2005 to 2014
$10.0M
Research Services CoreP2CHD050924 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAREN B GUZZO · 2015 to 2026
$9.6M
Genome Wide Association Study for Childhood ObesityR01HD056465 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI GRANT, STRUAN F A · 2008 to 2024
$9.5M
Gene-Environment Interactions and Weight GainR01HD057194 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GORDON-LARSEN, PENNY, NORTH, KARI E. · 2008 to 2019
$5.9M
North Carolina Translational & Clinical Sciences Institute (NC TraCS)KL2TR001109 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BUSE, JOHN BERNARD, CAREY, TIMOTHY S · 2013 to 2017
$5.7M
Leveraging Hispanic/Latino diversity to map and characterize cardiovascular disease lociR01HL163262 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Lindsay Fernandez-Rhodes, Mariaelisa Graff · 2023 to 2026
$2.9M
NCATS NIH HHS KL2 TR001109NHLBI NIH HHS R01 HL163262NICHD NIH HHS P01 HD031921NICHD NIH HHS P01-HD31921NICHD NIH HHS P2C HD050924NICHD NIH HHS R01 HD056465NICHD NIH HHS R01HD056465NICHD NIH HHS R01 HD057194NICHD NIH HHS R01HD057194NICHD NIH HHS R24 HD050924NIEHS NIH HHS P30 ES010126
6 · The paper itself

Abstract

backgroundAdolescent obesity is predictive of future weight gain, obesity and adult onset severe obesity (body mass index [BMI] ≥40 kg m(-2) ). Despite successful efforts to identify Single Nucleotide Polymorphisms (SNPs) influencing BMI, <5% of the 40-80% heritability of the phenotype has been explained. Identification of gene-gene (G-G) interactions between known variants can help explain this hidden heritability as well as identify potential biological mechanisms affecting weight gain during this critical developmental period.

objectiveWe have recently shown distinct genetic effects on BMI across the life course, and thus it is important to examine the evidence for epistasis in adolescence.

methodsIn adolescent participants of European descent from wave II of the National Longitudinal Study of Adolescent Health (Add Health, n = 5072, ages 12-21, 52.5% female), we tested 34 established BMI-related SNPs for G-G interaction effects on BMI z-score. We used mixed-effects regression, assuming multiplicative interaction models adjusting for age, sex and geographic region, with random effects for family and school.

resultsFor 28 G-G interactions that were nominally significant (P < 0.05), we attempted to replicate our results in an adolescent sample from the Childhood European American Cohort from Philadelphia. In the replication study, one interaction (PRKD1-FTO) was significant after correction for multiple testing.

conclusionsOur results are suggestive of epistatic effects on BMI during adolescence and point to potentially interactive effects between genes in biological pathways important in obesity.

Indexed as

Body Mass IndexPolymorphism, Single NucleotideAdolescentAdolescent HealthEpistasis, GeneticFemaleHumansLongitudinal StudiesMalePediatric ObesityPhenotypeUnited StatesWeight GainWhite PeopleYoung AdultAdolescenceepistasisgeneticsobesity

Identifiers

PMID25893265
PMCPMC4615264
OpenAlexW1844935223

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.