Evidence map›Paper›PMID 25889274›Full record

ArticleDevelopmental biology2015

Follicle dynamics and global organization in the intact mouse ovary.

Mehlika Faire, Amanda Skillern, Ripla Arora, Daniel H Nguyen, Jason Wang, Chester Chamberlain, Michael S German, Jennifer C Fung, Diana J Laird

Abstract read
In one paragraph

Article in Developmental biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

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  15. Article
  16. A Roadmap for Three-Dimensional Analysis of the Intact Mouse Ovary.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mehlika FaireDepartment of Ob/Gyn and Reproductive Sciences, Center for Reproductive Sciences, Eli and Edythe Broad, Center for Regeneration Medicine & Stem Cell Research, United States.
Amanda SkillernDepartment of Ob/Gyn and Reproductive Sciences, Center for Reproductive Sciences, Eli and Edythe Broad, Center for Regeneration Medicine & Stem Cell Research, United States.
Ripla AroraDepartment of Ob/Gyn and Reproductive Sciences, Center for Reproductive Sciences, Eli and Edythe Broad, Center for Regeneration Medicine & Stem Cell Research, United States.
Daniel H NguyenDepartment of Ob/Gyn and Reproductive Sciences, Center for Reproductive Sciences, Eli and Edythe Broad, Center for Regeneration Medicine & Stem Cell Research, United States.
Jason WangDiabetes Center UCSF, 35 Medical Center Way, San Francisco, CA 94043, United States.
Chester ChamberlainDiabetes Center UCSF, 35 Medical Center Way, San Francisco, CA 94043, United States.
Michael S GermanDiabetes Center UCSF, 35 Medical Center Way, San Francisco, CA 94043, United States.
Jennifer C FungDepartment of Ob/Gyn and Reproductive Sciences, Center for Reproductive Sciences, Eli and Edythe Broad, Center for Regeneration Medicine & Stem Cell Research, United States.
Diana J LairdDepartment of Ob/Gyn and Reproductive Sciences, Center for Reproductive Sciences, Eli and Edythe Broad, Center for Regeneration Medicine & Stem Cell Research, United States. Electronic address: diana.laird@ucsf.edu.

Funding

Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VAISSE, CHRISTIAN · 2003 to 2019
$21.8M
PREDOCTORAL TRAINING IN DEVELOPMENTAL BIOLOGYT32HD007470 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Todd Nystul · 1994 to 2026
$7.7M
REPRODUCTIVE ENDOCRINOLOGYT32HD007263 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MELLON, SYNTHIA H · 1985 to 2023
$4.1M
Cell competition in the developing mouse germlineDP2OD007420 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LAIRD, DIANA J · 2010 to 2014
$2.4M
Kinetics of Chromosome Synapsis During MeiosisR01GM097213 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FUNG, JENNIFER C · 2011 to 2015
$1.4M
Assessing transgenerational effects of Phthalates on primordial germ cellsR21ES023297 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LAIRD, DIANA J · 2013 to 2015
$944k
NICHD NIH HHS T32 HD007263NICHD NIH HHS T32HD007263NICHD NIH HHS T32 HD007470NIDDK NIH HHS P30 DK063720NIEHS NIH HHS R21 ES023297NIGMS NIH HHS NIHR01GM097213NIGMS NIH HHS R01 GM097213NIH HHS DP2 OD007420NIH HHS NIH1DP2OD007420
6 · The paper itself

Abstract

Quantitative analysis of tissues and organs can reveal large-scale patterning as well as the impact of perturbations and aging on biological architecture. Here we develop tools for imaging of single cells in intact organs and computational approaches to assess spatial relationships in 3D. In the mouse ovary, we use nuclear volume of the oocyte to read out quiescence or growth of oocyte-somatic cell units known as follicles. This in-ovary quantification of non-growing follicle dynamics from neonate to adult fits a mathematical function, which corroborates the model of fixed oocyte reserve. Mapping approaches show that radial organization of folliculogenesis established in the newborn ovary is preserved through adulthood. By contrast, inter-follicle clustering increases during aging with different dynamics depending on size. These broadly applicable tools can reveal high dimensional phenotypes and age-related architectural changes in other organs. In the adult mouse pancreas, we find stochastic radial organization of the islets of Langerhans but evidence for localized interactions among the smallest islets.

Indexed as

AgingAlgorithmsAnimalsFemaleImaging, Three-DimensionalIslets of LangerhansMiceMice, Inbred C57BLOocytesOvarian FollicleSingle-Cell AnalysisConfocal imagingIslet of LangerhansOvaryPancreasPrimordial follicleWhole tissue labeling

Identifiers

PMID25889274
PMCPMC4469539

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.