Evidence map›Paper›PMID 25889072›Full record

ArticleVeterinary research2015

Comparative analysis of cytokine transcript profiles within mediastinal lymph node compartments of pigs after infection with porcine reproductive and respiratory syndrome genotype 1 strains differing in pathogenicity.

Obdulio García-Nicolás, Rubén S Rosales, Francisco J Pallarés, David Risco, Juan J Quereda, Simon P Graham, Jean-Pierre Frossard, Sophie B Morgan, Falko Steinbach, Trevor W Drew and 2 more

Open access · goldAbstract read
In one paragraph

Article in Veterinary research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.9field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Obdulio García-NicolásDepartment of Anatomy and Comparative Pathology, Faculty of Veterinary Medicine, Murcia University, "Mare Nostrum Excellence Campus - 3738", 30100, Murcia, Spain. ogn14346@um.es.
Rubén S RosalesDepartment of Bacteriology, Animal and Plant Health Agency, Addlestone, Surrey, KT15 3NB, UK. ruben.rosales@apha.gsi.gov.uk.
Francisco J PallarésDepartment of Anatomy and Comparative Pathology, Faculty of Veterinary Medicine, Murcia University, "Mare Nostrum Excellence Campus - 3738", 30100, Murcia, Spain. pallares@um.es.
David RiscoRed de Grupos de Investigación Recursos Faunísticos, Facultad de Veterinaria, Universidad de Extremadura, 10003, Cáceres, Spain. driscope@gmail.com.
Juan J QueredaSpanish National Center of Biotechnology (CSIC), C/Darwin 3, Campus de Cantoblanco, 28049, Madrid, Spain. jjquere@um.es.
Simon P GrahamDepartment of Virology, Animal and Plant Health Agency, Addlestone, Surrey, KT15 3NB, UK. Simon.Graham@apha.gsi.gov.uk.
Jean-Pierre FrossardDepartment of Virology, Animal and Plant Health Agency, Addlestone, Surrey, KT15 3NB, UK. Jean-pierre.frossard@apha.gsi.gov.uk.
Sophie B MorganDepartment of Virology, Animal and Plant Health Agency, Addlestone, Surrey, KT15 3NB, UK. Sophie.morgan@yahoo.co.uk.
Falko SteinbachDepartment of Virology, Animal and Plant Health Agency, Addlestone, Surrey, KT15 3NB, UK. falko.steinbach@apha.gsi.gov.uk.
Trevor W DrewDepartment of Virology, Animal and Plant Health Agency, Addlestone, Surrey, KT15 3NB, UK. Trevor.drew@apha.gsi.gov.uk.
Tony S StricklandDepartment of Pathology, Animal and Plant Health Agency, Addlestone, KT15 3NB, UK. Tony.strickland@apha.gsi.gov.uk.
Francisco J SalgueroDepartment of Pathology, Animal and Plant Health Agency, Addlestone, KT15 3NB, UK. f.salguerobodes@surrey.ac.uk.
Animal and Plant Health Agency · GBUniversidad de Murcia · ESUniversity of Surrey · GBConsejo Superior de Investigaciones Científicas · ESUniversidad de Extremadura · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Porcine reproductive and respiratory syndrome virus (PRRSV) induces a weak immune response enabling it to persist in different organs of infected pigs. This has been attributed to the ability of PRRSV to influence the induction of cytokine responses. In this study, we investigated the cytokine transcriptional profiles in different compartments of the mediastinal lymph node of pigs infected with three genotype 1 PRRSV strains of differing pathogenicity: the low virulence prototype Lelystad virus (LV), and UK field strain 215-06 and the highly virulent subtype 3 SU1-Bel isolate from Belarus. We have used a combination of laser capture micro-dissection (LCM) followed by real time quantitative PCR (RT-qPCR) and immunohistochemical (IHC) detection of immune cell markers (CD3, CD79a and MAC387) and RT-qPCR quantification of PRRSV and cytokine transcripts. Compared to mock infected pigs, we found a significant downregulation of TNF-α and IFN-α in follicular and interfollicular areas of the mediastinal lymph node from 3 days post-infection (dpi) in animals infected with all three strains. This was accompanied by a transient B cell depletion and T cell and macrophage infiltration in the follicles together with T cell depletion in the interfollicular areas. A delayed upregulation of IFN-γ and IL-23p19 was observed mainly in the follicles. The PRRSV load was higher in all areas and time-points studied in the animals infected with the SU1-Bel strain. This paper describes the first application of LCM to study the cytokine transcript profiles and virus distribution in different compartments of the lymph node of pigs.

Indexed as

TranscriptomeAnimalsCytokinesLymph NodesMediastinumPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusReverse Transcriptase Polymerase Chain ReactionRNA, ViralSwineVirulenceCytokinesRNA, Viral

Identifiers

PMID25889072
PMCPMC4364558
OpenAlexW2127778386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.