Evidence map›Paper›PMID 25888704›Full record

ReviewJournal of immunology (Baltimore, Md. : 1950)2015

No vacancy: how beneficial microbes cooperate with immunity to provide colonization resistance to pathogens.

Martina Sassone-Corsi, Manuela Raffatellu

Abstract readReview
In one paragraph

Review in Journal of immunology (Baltimore, Md. : 1950), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 180 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
180citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

180 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Gut microbes · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Gut commensalMicrobiology spectrum · 2026
    Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Infection and immunity · 2025
    Review
  20. Review

120 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Martina Sassone-CorsiDepartment of Microbiology and Molecular Genetics and Institute for Immunology, University of California Irvine School of Medicine, Irvine, CA 92697.
Manuela RaffatelluDepartment of Microbiology and Molecular Genetics and Institute for Immunology, University of California Irvine School of Medicine, Irvine, CA 92697 manuelar@uci.edu.

Funding

Mucosal barrier function during Salmonella infectionR01AI083663 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI RAFFATELLU, MANUELA · 2010 to 2014
$1.9M
The role of the circadian clock during Salmonella infectionR21AI105374 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI RAFFATELLU, MANUELA, SASSONE-CORSI, PAOLO · 2014 to 2015
$424k
Targeting iron acquisition in Salmonella with siderophore-based immunizationR21AI101784 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI NOLAN, ELIZABETH M, RAFFATELLU, MANUELA · 2014 to 2015
$418k
NIAID NIH HHS AI083663NIAID NIH HHS AI101784NIAID NIH HHS AI105374NIAID NIH HHS R01 AI083663NIAID NIH HHS R21 AI101784NIAID NIH HHS R21 AI105374
6 · The paper itself

Abstract

The mammalian intestine harbors a community of trillions of microbes, collectively known as the gut microbiota, which coevolved with the host in a mutually beneficial relationship. Among the numerous gut microbial species, certain commensal bacteria are known to provide health benefits to the host when administered in adequate amounts and, as such, are labeled "probiotics." We review some of the mechanisms by which probiotics and other beneficial commensals provide colonization resistance to pathogens. The battle for similar nutrients and the bacterial secretion of antimicrobials provide a direct means of competition between beneficial and harmful microbes. Beneficial microbes can also indirectly diminish pathogen colonization by stimulating the development of innate and adaptive immunity, as well as the function of the mucosal barrier. Altogether, we gather and present evidence that beneficial microbes cooperate with host immunity in an effort to shut out pathogens.

Indexed as

AnimalsBacteriaHost-Pathogen InteractionsHumansImmunityMicrobiotaSymbiosis

Identifiers

PMID25888704
PMCPMC4402713

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.