Evidence map›Paper›PMID 25888462›Full record

Trial reportBMC infectious diseases2015

Prospective evaluation of GeneXpert for the diagnosis of HIV- negative pediatric TB cases.

Do Chau Giang, Tran Ngoc Duong, Dang Thi Minh Ha, Ho Thi Nhan, Marcel Wolbers, Nguyen Thi Quynh Nhu, Dorothee Heemskerk, Nguyen Dang Quang, Doan Thanh Phuong, Pham Thu Hang and 5 more

Open access · goldAbstract readClinical TrialComparative Study
In one paragraph

Trial report in BMC infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 3 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 3 syntheses or guidelines pooled it, 43 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  4. Trial
  5. Article
  6. Article
  7. Cost-effectiveness of TB diagnostic technologies in Ethiopia: a modelling study.Cost effectiveness and resource allocation : C/E · 2024
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  16. Quality of care in childhood tuberculosis diagnosis at primary care clinics in Kampala, Uganda.The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease · 2018
    Article
  17. Article
  18. X-pert MTB/RIFJournal of clinical medicine · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Do Chau GiangPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. giangdc@oucru.org.
Tran Ngoc DuongPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. ngocduong_06@yahoo.com.
Dang Thi Minh HaPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. hadtm@oucru.org.
Ho Thi NhanOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam. nhanht@oucru.org.
Marcel WolbersOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam. mwolbers@oucru.org.
Nguyen Thi Quynh NhuOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam. nhuntq@yahoo.com.vn.
Dorothee HeemskerkOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam. dheemskerk@oucru.org.
Nguyen Dang QuangPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. ngocduong_06@yahoo.com.vn.
Doan Thanh PhuongPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. ngocduong_06@yahoo.com.vn.
Pham Thu HangPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. phamhang1971@yahoo.com.vn.
Tran Huu LocPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. loc3725@yahoo.com.
Nguyen Thi Ngoc LanPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. ngoclan0456@yahoo.com.
Nguyen Huy DungPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam. bshuydung@yahoo.com.
Jeremy FarrarOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam. jeremyjfarrar@yahoo.com.
Maxine CawsOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam. mcaws@hotmail.com.
Pham Ngoc Thach Hospital · VNOxford University Clinical Research Unit · VNLiverpool School of Tropical Medicine · GB

Funding

Wellcome Trust 089276Wellcome Trust 089276/Z/09/Z
6 · The paper itself

Abstract

backgroundThe GeneXpertMTB/RIF (Xpert) assay is now recommended by WHO for diagnosis of tuberculosis (TB) in children but evaluation data is limited.

methodsOne hundred and fifty consecutive HIV negative children (<15 years of age) presenting with suspected TB were enrolled at a TB referral hospital in Ho Chi Minh City, Vietnam. 302 samples including sputum (n = 79), gastric fluid (n = 215), CSF (n = 3), pleural fluid (n = 4) and cervical lymphadenopathic pus (n = 1) were tested by smear, automated liquid culture (Bactec MGIT) and Xpert. Patients were classified retrospectively using the standardised case definition into confirmed, probable, possible, TB unlikely or not TB categories. Test accuracy was evaluated against 2 gold standards: [1] clinical (confirmed, probable and possible TB) and [2] 'confirmed TB' alone.

resultsThe median age of participants was 18 months [IQR 5-170]. When test results were aggregated by patient, the sensitivity of smear, Xpert and MGIT against clinical diagnosis as the gold standard were 9.2% (n = 12/131) [95%CI 4.2; 14.1], 20.6% (n = 27/131) [95%CI 13.7; 27.5] and 29.0% (n = 38/131) [21.2;36.8], respectively. Specificity 100% (n = 19/19), 94.7% (n = 18/19), 94.7% (n = 18/19), respectively. Xpert was more sensitive than smear (P = <0.001) and less sensitive than MGIT (P = 0.002).

conclusionsThe systematic use of Xpert will increase early TB case confirmation in children and represents a major advance but sensitivity of all tests remains unacceptably low. Improved rapid diagnostic tests and algorithm approaches for pediatric TB are still an urgent research priority.

Indexed as

AdolescentAlgorithmsChildChild, PreschoolDNA, BacterialFemaleHIV InfectionsHumansInfantMaleMycobacterium tuberculosisProspective StudiesSensitivity and SpecificitySputumTuberculosisVietnamDNA, Bacterial

Identifiers

PMID25888462
PMCPMC4337193
OpenAlexW1980533620

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.