Evidence map›Paper›PMID 25888407›Full record

ArticleBMC evolutionary biology2015

Eurasian house mouse (Mus musculus L.) differentiation at microsatellite loci identifies the Iranian plateau as a phylogeographic hotspot.

Emilie A Hardouin, Annie Orth, Meike Teschke, Jamshid Darvish, Diethard Tautz, François Bonhomme

Abstract read
In one paragraph

Article in BMC evolutionary biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

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  14. ForestEcology and evolution · 2021
    Article
  15. The mutational load in natural populations is significantly affected by high primary rates of retroposition.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
  17. Article
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  20. Population Genomics of the House Mouse and the Brown Rat.Methods in molecular biology (Clifton, N.J.) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Emilie A HardouinMax Planck Institute of Evolutionary Biology, Department of Evolutionary Genetics, August-Thienemann-Str. 2, 24306, Plön, Germany. ehardouin@bournemouth.ac.uk.
Annie OrthInstitut des Sciences de l'Evolution, CNRS, IRD, EPHE, Université de Montpellier, Pl. E. Bataillon, 34095, Montpellier, France. annie.orth@univ-montp2.fr.
Meike TeschkeMax Planck Institute of Evolutionary Biology, Department of Evolutionary Genetics, August-Thienemann-Str. 2, 24306, Plön, Germany. meike.teschke@dfg.de.
Jamshid DarvishRodentology Research group, Ferdowsi University of Mashhad, Mashhad, Iran. biosystematique@gmail.com.
Diethard TautzMax Planck Institute of Evolutionary Biology, Department of Evolutionary Genetics, August-Thienemann-Str. 2, 24306, Plön, Germany. tautz@evolbio.mpg.de.
François BonhommeInstitut des Sciences de l'Evolution, CNRS, IRD, EPHE, Université de Montpellier, Pl. E. Bataillon, 34095, Montpellier, France. francois.bonhomme@univ-montp2.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe phylogeography of the house mouse (Mus musculus L.), an emblematic species for genetic and biomedical studies, is only partly understood, essentially because of a sampling bias towards its most peripheral populations in Europe, Asia and the Americas. Moreover, the present-day phylogeographic hypotheses stem mostly from the study of mitochondrial lineages. In this article, we complement the mtDNA studies with a comprehensive survey of nuclear markers (19 microsatellite loci) typed in 963 individuals from 47 population samples, with an emphasis on the putative Middle-Eastern centre of dispersal of the species.

resultsBased on correspondence analysis, distance and allele-sharing trees, we find a good coherence between geographical origin and genetic make-up of the populations. We thus confirm the clear distinction of the three best described peripheral subspecies, M. m. musculus, M. m. domesticus and M. m. castaneus. A large diversity was found in the Iranian populations, which have had an unclear taxonomic status to date. In addition to samples with clear affiliation to M. m. musculus and M. m. domesticus, we find two genetic groups in Central and South East Iran, which are as distinct from each other as they are from the south-east Asian M. m. castaneus. These groups were previously also found to harbor distinct mitochondrial haplotypes.

conclusionWe propose that the Iranian plateau is home to two more taxonomic units displaying complex primary and secondary relationships with their long recognized neighbours. This central region emerges as the area with the highest known diversity of mouse lineages within a restricted geographical area, designating it as the focal place to study the mechanisms of speciation and diversification of this species.

Indexed as

PhylogeographyAllelesAnimalsDNA, MitochondrialGenetics, PopulationIranMiceMicrosatellite RepeatsDNA, Mitochondrial

Identifiers

PMID25888407
PMCPMC4342898

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.