Evidence map›Paper›PMID 25888100›Full record

ArticleBMC plant biology2015

Comparative proteome analysis of embryo and endosperm reveals central differential expression proteins involved in wheat seed germination.

Miao He, Chong Zhu, Kun Dong, Ting Zhang, Zhiwei Cheng, Jiarui Li, Yueming Yan

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
14.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
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  3. Ethrel-induced release of fresh seed dormancy causes remodelling of amylase activity, proteomics, phytohormone and fatty acid profile of groundnutPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023
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  10. Article
  11. Review
  12. Temperature Regulation of Primary and Secondary Seed Dormancy inInternational journal of molecular sciences · 2020
    Article
  13. Article
  14. Seed Proteomic Profiles of ThreeBioMed research international · 2020
    Article
  15. Article
  16. Article
  17. Insights on the Proteases Involved in Barley and Wheat Grain Germination.International journal of molecular sciences · 2019
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Miao HeCollege of Life Science, Capital Normal University, Beijing, 100048, China. 872795535@qq.com.
Chong ZhuCollege of Life Science, Capital Normal University, Beijing, 100048, China. zhuchong106@126.com.
Kun DongCollege of Life Science, Capital Normal University, Beijing, 100048, China. dongkun307@163.com.
Ting ZhangCollege of Life Science, Capital Normal University, Beijing, 100048, China. bicy_lre@163.com.
Zhiwei ChengCollege of Life Science, Capital Normal University, Beijing, 100048, China. HendyCZW@aliyun.com.
Jiarui LiDepartment of Plant Pathology, Kansas State University, Manhattan, KS 66506, USA. jli2@ksu.edu.
Yueming YanCollege of Life Science, Capital Normal University, Beijing, 100048, China. yanym@cnu.edu.cn.
Capital Normal University · CNBeijing Normal University · CNKansas State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWheat seeds provide a staple food and an important protein source for the world's population. Seed germination is vital to wheat growth and development and directly affects grain yield and quality. In this study, we performed the first comparative proteomic analysis of wheat embryo and endosperm during seed germination.

resultsThe proteomic changes in embryo and endosperm during the four different seed germination stages of elite Chinese bread wheat cultivar Zhengmai 9023 were first investigated. In total, 74 and 34 differentially expressed protein (DEP) spots representing 63 and 26 unique proteins were identified in embryo and endosperm, respectively. Eight common DEP were present in both tissues, and 55 and 18 DEP were specific to embryo and endosperm, respectively. These identified DEP spots could be sorted into 13 functional groups, in which the main group was involved in different metabolism pathways, particularly in the reserves necessary for mobilization in preparation for seed germination. The DEPs from the embryo were mainly related to carbohydrate metabolism, proteometabolism, amino acid metabolism, nucleic acid metabolism, and stress-related proteins, whereas those from the endosperm were mainly involved in protein storage, carbohydrate metabolism, inhibitors, stress response, and protein synthesis. During seed germination, both embryo and endosperm had a basic pattern of oxygen consumption, so the proteins related to respiration and energy metabolism were up-regulated or down-regulated along with respiration of wheat seeds. When germination was complete, most storage proteins from the endosperm began to be mobilized, but only a small amount was degraded during germination. Transcription expression of six representative DEP genes at the mRNA level was consistent with their protein expression changes.

conclusionWheat seed germination is a complex process with imbibition, stirring, and germination stages, which involve a series of physiological, morphological, and proteomic changes. The first process is a rapid water uptake, in which the seed coat becomes softer and the physical state of storage materials change gradually. Then the germinated seed enters the second process (a plateau phase) and the third process (the embryonic axes elongation). Seed embryo and endosperm display distinct differentially expressed proteins, and their synergistic expression mechanisms provide a basis for the normal germination of wheat seeds.

Indexed as

Gene Expression Regulation, PlantGerminationEndospermPlant ProteinsProteomeSeedsTriticumPlant ProteinsProteome

Identifiers

PMID25888100
PMCPMC4407426
OpenAlexW2011533132

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.