Evidence map›Paper›PMID 25887918›Full record

ArticleBMC plant biology2015

Functional characterization of the diatom cyclin-dependent kinase A2 as a mitotic regulator reveals plant-like properties in a non-green lineage.

Marie J J Huysman, Atsuko Tanaka, Chris Bowler, Wim Vyverman, Lieven De Veylder

Abstract read
In one paragraph

Article in BMC plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Effects ofApplied and environmental microbiology · 2025
    Article
  2. Sugar signals pedal the cell cycle!Frontiers in plant science · 2024
    Review
  3. Article
  4. Article
  5. Effect of cell cycle arrest on intermediate metabolism in the marine diatomProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  6. Genetic and metabolic engineering in diatoms.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marie J J HuysmanDepartment of Plant Systems Biology, Flanders Institute for Biotechnology (VIB), 9052, Ghent, Belgium. marie.huysman@psb.vib-ugent.be.
Atsuko TanakaEnvironmental and Evolutionary Genomics Section, Institut de Biologie de l'Ecole Normale Supérieure, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8186, Institut National de la Santé et de la Recherche Médicale U1024, Ecole Normale Supérieure, 75230, Paris, Cedex 05, France. tanaka@fsc.hokudai.ac.jp.
Chris BowlerEnvironmental and Evolutionary Genomics Section, Institut de Biologie de l'Ecole Normale Supérieure, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8186, Institut National de la Santé et de la Recherche Médicale U1024, Ecole Normale Supérieure, 75230, Paris, Cedex 05, France. cbowler@biologie.ens.fr.
Wim VyvermanProtistology and Aquatic Ecology, Department of Biology, Ghent University, 9000, Ghent, Belgium. Wim.Vyverman@UGent.be.
Lieven De VeylderDepartment of Plant Systems Biology, Flanders Institute for Biotechnology (VIB), 9052, Ghent, Belgium. lieven.deveylder@psb.vib-ugent.be.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCyclin-dependent kinases (CDKs) are crucial regulators of cell cycle progression in eukaryotes. The diatom CDKA2 was originally assigned to the classical A-type CDKs, but its cell cycle phase-specific transcription at the G2-to-M phase transition is typical for plant-specific B-type CDKs.

resultsHere, we report the functional characterization of CDKA2 from the diatom Phaeodactylum tricornutum. Through a yeast two-hybrid library screen, CDKA2 was found to interact with the G2/M-specific CDK scaffolding factor CKS1. Localization of CDKA2 was found to be nuclear in interphase cells, while in cells undergoing cytokinesis, the signal extended to the cell division plane. In addition, overexpression of CDKA2 induced an overall reduction in the cell growth rate. Expression analysis of cell cycle marker genes in the overexpression lines indicates that this growth reduction is primarily due to a prolongation of the mitotic phase.

conclusionsOur study indicates a role for CDKA2 during cell division in diatoms. The functional characterization of a CDK with clear CDKB properties in a non-green organism questions whether the current definition of B-type CDKs being plant-specific might need revision.

Indexed as

MitosisAlgal ProteinsAmino Acid SequenceCyclin-Dependent KinasesDiatomsGene Expression RegulationMolecular Sequence DataPhylogenyAlgal ProteinsCyclin-Dependent Kinases

Identifiers

PMID25887918
PMCPMC4392632

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.