ArticleBMC evolutionary biology2015
Evolution of the bamboos (Bambusoideae; Poaceae): a full plastome phylogenomic analysis.
Article in BMC evolutionary biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.
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Who cites it
64 citing papers in PubMed, 182 citations in OpenAlex.
- Bamboo-Enabled Nanomaterials for Biomedical Applications.Polymers · 2026Review
- Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection.BMC plant biology · 2026Article
- Effects of Processing on Antinutrients, Bioactives and Functional Properties of Bamboo Shoots (Foods (Basel, Switzerland) · 2026Article
- Comparative chloroplast genomics reveals codon usage bias, simple sequence repeat dynamics, and phylogenomic relationships in Urticaceae.Frontiers in plant science · 2026Article
- Chloroplast genome analysis of Dendrocalamus × mutatus and its implications for bamboo classification.BMC plant biology · 2025Article
- Effects of retaining different number of mother bamboo on the growth and NSCs allocation of new-born seedlings in Phyllostachys edulis at different age.BMC plant biology · 2025Article
- Two new species of Ascomycota on bamboo leaves in Fujian, China.Frontiers in microbiology · 2025Article
- Phylogenomic profiles of whole-genome duplications in Poaceae and landscape of differential duplicate retention and losses among major Poaceae lineages.Nature communications · 2024Article
- Chloroplast genome of Calamus tetradactylus revealed rattan phylogeny.BMC genomic data · 2024Article
- Unveiling the conserved nature ofFrontiers in plant science · 2024Article
- Phylogenomics and topological conflicts in the tribe Anthospermeae (Rubiaceae).Ecology and evolution · 2024Article
- Reed bamboos drive skull shape evolution in bush frogs of the Western Ghats, Peninsular India.Ecology and evolution · 2023Article
- Identification and Characterization ofInternational journal of molecular sciences · 2023Article
- Integrating genomic and morphological data into bamboo taxonomic and evolutionary studies.Plant diversity · 2023Article
- New insights into intergeneric relationships of Hickeliinae (Poaceae: Bambusoideae) revealed by complete plastid genomes.Plant diversity · 2023Article
- Poaceae Chloroplast Genome Sequencing: Great Leap Forward in Recent Ten Years.Current genomics · 2023Review
- Coalescent-Based Species Delimitation in Herbaceous Bamboos (Bambusoideae, Olyreae) from Eastern Brazil: Implications for Taxonomy and Conservation in a Group with Weak Morphological Divergence Coupled with Low Genetic Diversity.Plants (Basel, Switzerland) · 2022Article
- Transcriptome-wide analysis reveals core transcriptional regulators associated with culm development and variation inHeliyon · 2022Article
- Complete Chloroplast Genome Features ofGenes · 2022Article
- Article
4 more citing papers are in PubMed but not listed here.
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Authors and funding
5 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundBambusoideae (Poaceae) comprise three distinct and well-supported lineages: tropical woody bamboos (Bambuseae), temperate woody bamboos (Arundinarieae) and herbaceous bamboos (Olyreae). Phylogenetic studies using chloroplast markers have generally supported a sister relationship between Bambuseae and Olyreae. This suggests either at least two origins of the woody bamboo syndrome in this subfamily or its loss in Olyreae.
resultsHere a full chloroplast genome (plastome) phylogenomic study is presented using the coding and noncoding regions of 13 complete plastomes from the Bambuseae, eight from Olyreae and 10 from Arundinarieae. Trees generated using full plastome sequences support the previously recovered monophyletic relationship between Bambuseae and Olyreae. In addition to these relationships, several unique plastome features are uncovered including the first mitogenome-to-plastome horizontal gene transfer observed in monocots.
conclusionsPhylogenomic agreement with previous published phylogenies reinforces the validity of these studies. Additionally, this study presents the first published plastomes from Neotropical woody bamboos and the first full plastome phylogenomic study performed within the herbaceous bamboos. Although the phylogenomic tree presented in this study is largely robust, additional studies using nuclear genes support monophyly in woody bamboos as well as hybridization among previous woody bamboo lineages. The evolutionary history of the Bambusoideae could be further clarified using transcriptomic techniques to increase sampling among nuclear orthologues and investigate the molecular genetics underlying the development of woody and floral tissues.
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