ArticleBMC genomics2015
A high density GBS map of bread wheat and its application for dissecting complex disease resistance traits.
Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers, 1 of them a synthesis that pooled it.
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Who cites it
96 citing papers in PubMed, 1 synthesis or guideline pooled it, 198 citations in OpenAlex.
- Genome-wide meta-analysis of QTL for morphological related traits of flag leaf in bread wheat.PloS one · 2022Pooled it
- Genetic structure analysis of Glycyrrhiza species and identification of SNP-loci associated with secondary metabolites in G. glabra.BMC genomics · 2026Article
- Haplotype-based nested association mapping for net form net blotch response in Australian barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Identification of resistance sources and genomic regions regulating spot blotch resistance in Asian bread wheat (Triticum aestivum L.) via genome-wide association study.The plant genome · 2026Article
- Genome-wide association study of common bean (Phaseolus vulgaris L.) unveils novel loci governing root-to-seed zinc allocation.Scientific reports · 2025Article
- Recombination and structural variation in a large 8-founder wheat MAGIC population.G3 (Bethesda, Md.) · 2025Article
- Novel resistance loci for quantitative resistance to Septoria tritici blotch in Asian wheat (Triticum aestivum) via genome-wide association study.BMC plant biology · 2024Article
- Genetic analysis of agronomic and physiological traits associated with latex yield revealed complex genetic bases inHeliyon · 2024Article
- Genetic Heterogeneity in Cowpea Genotypes (Genes · 2024Article
- Assessment of Indian wheat germplasm for Septoria nodorum blotch and tan spot reveals new QTLs conferring resistance along with recessive alleles ofFrontiers in plant science · 2023Article
- Characterization of Brazilian spring wheat germplasm and its potential for increasing wheat genetic diversity in Canada.Frontiers in genetics · 2023Article
- Genomic selection for spot blotch in bread wheat breeding panels, full-sibs and half-sibs and index-based selection for spot blotch, heading and plant height.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Article
- Construction of a genome-wide genetic linkage map and identification of quantitative trait loci for powdery mildew resistance inFrontiers in plant science · 2022Article
- Multi-stage resistance toFrontiers in plant science · 2022Article
- QTL Mapping of Adult Plant Resistance to Stripe Rust in a Doubled Haploid Wheat Population.Frontiers in genetics · 2022Article
- Article
- New Genotypes and Genomic Regions for Resistance to Wheat Blast in South Asian Germplasm.Plants (Basel, Switzerland) · 2021Article
- Identification of genomic loci conferring broad-spectrum resistance to multiple nematode species in exotic soybean accession PI 567305.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Identification and Fine-Mapping of Quantitative Trait Loci Controlling Plant Height in Central European Winter Triticale (×Plants (Basel, Switzerland) · 2021Article
36 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
13 authors at 2 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundGenotyping-by-sequencing (GBS) is a high-throughput genotyping approach that is starting to be used in several crop species, including bread wheat. Anchoring GBS tags on chromosomes is an important step towards utilizing them for wheat genetic improvement. Here we use genetic linkage mapping to construct a consensus map containing 28644 GBS markers.
resultsThree RIL populations, PBW343 × Kingbird, PBW343 × Kenya Swara and PBW343 × Muu, which share a common parent, were used to minimize the impact of potential structural genomic variation on consensus-map quality. The consensus map comprised 3757 unique positions, and the average marker distance was 0.88 cM, obtained by calculating the average distance between two adjacent unique positions. Significant variation of segregation distortion was observed across the three populations. The consensus map was validated by comparing positions of known rust resistance genes, and comparing them to wheat reference genome sequences recently published by the International Wheat Genome Sequencing Consortium, Rye and Ae. tauschii genomes. Three well-characterized rust resistance genes (Sr58/Lr46/Yr29, Sr2/Yr30/Lr27, and Sr57/Lr34/Yr18) and 15 published QTLs for wheat rusts were validated with high resolution. Fifty-two per cent of GBS tags on the consensus map were successfully aligned through BLAST to the right chromosomes on the wheat reference genome sequence.
conclusionThe consensus map should provide a useful basis for analyzing genome-wide variation of complex traits. The identified genes can then be explored as genetic markers to be used in genomic applications in wheat breeding.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.