Evidence map›Paper›PMID 25886260›Full record

ArticleVirology journal2015

A small molecule inhibitor of dengue virus type 2 protease inhibits the replication of all four dengue virus serotypes in cell culture.

Rajendra Raut, Hemalatha Beesetti, Poornima Tyagi, Ira Khanna, Swatantra K Jain, Variam U Jeankumar, Perumal Yogeeswari, Dharmarajan Sriram, Sathyamangalam Swaminathan

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 61 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Rajendra RautRecombinant Gene Products Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India. rajeraut@gmail.com.
Hemalatha BeesettiDepartment of Biological Sciences, Birla Institute of Technology and Science Pilani, Hyderabad Campus, Hyderabad, 500078, India. hbks.13@gmail.com.
Poornima TyagiRecombinant Gene Products Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India. poornima.icg@gmail.com.
Ira KhannaDepartment of General Medicine, Lady Hardinge Medical College, Shaheed Bhagat Singh Marg, New Delhi, 110001, India. irakhanna07@gmail.com.
Swatantra K JainDepartment of Biotechnology, Jamia Hamdard, Hamdard Nagar, New Delhi, 110062, India. skjain@jamiahamdard.ac.in.
Variam U JeankumarDepartment of Pharmacy, Birla Institute of Technology and Science Pilani, Hyderabad Campus, Hyderabad, 500078, India. jeanvariums@gmail.com.
Perumal YogeeswariDepartment of Pharmacy, Birla Institute of Technology and Science Pilani, Hyderabad Campus, Hyderabad, 500078, India. pyogee@hyderabad.bits-pilani.ac.in.
Dharmarajan SriramDepartment of Pharmacy, Birla Institute of Technology and Science Pilani, Hyderabad Campus, Hyderabad, 500078, India. dsriram@hyderabad.bits-pilani.ac.in.
Sathyamangalam SwaminathanDepartment of Biological Sciences, Birla Institute of Technology and Science Pilani, Hyderabad Campus, Hyderabad, 500078, India. swaminathan@hyderabad.bits-pilani.ac.in.
Birla Institute of Technology and Science, Pilani · INInternational Centre for Genetic Engineering and Biotechnology · INJamia Hamdard · INLady Hardinge Medical College · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDengue has emerged as the most significant of arboviral diseases in the 21st century. It is endemic to >100 tropical and sub-tropical countries around the world placing an estimated 3.6 billion people at risk. It is caused by four genetically similar but antigenically distinct, serotypes of dengue viruses. There is neither a vaccine to prevent nor a drug to treat dengue infections, at the present time. The major objective of this work was to explore the possibility of identifying a small molecule inhibitor of the dengue virus protease and assessing its ability to suppress viral replication in cultured cells.

methodsWe cloned, expressed and purified recombinant dengue virus type 2 protease. Using an optimized and validated fluorogenic peptide substrate cleavage assay to monitor the activity of this cloned dengue protease we randomly screened ~1000 small molecules from an 'in-house' library to identify potential dengue protease inhibitors.

resultsA benzimidazole derivative, named MB21, was found to be the most potent in inhibiting the cloned protease (IC₅₀ = 5.95 μM). In silico docking analysis indicated that MB21 binds to the protease in the vicinity of the active site. Analysis of kinetic parameters of the enzyme reaction suggested that MB21 presumably functions as a mixed type inhibitor. Significantly, this molecule identified as an inhibitor of dengue type 2 protease was also effective in inhibiting each one of the four serotypes of dengue viruses in infected cells in culture, based on analysis of viral antigen synthesis and infectious virus production. Interestingly, MB21 did not manifest any discernible cytotoxicity.

conclusionsThis work strengthens the notion that a single drug molecule can be effective against all four dengue virus serotypes. The molecule MB21 could be a potential candidate for 'hit-to-lead' optimization, and may pave the way towards developing a pan-dengue virus antiviral drug.

Indexed as

AnimalsAntiviral AgentsBenzimidazolesCell SurvivalChlorocebus aethiopsDengue VirusDrug Evaluation, PreclinicalKineticsMolecular Docking SimulationProtease InhibitorsProteolysisSerine EndopeptidasesSerogroupVero CellsViral ProteasesVirus ReplicationAntiviral AgentsbenzimidazoleBenzimidazolesNS3 protease, dengue virusProtease InhibitorsSerine EndopeptidasesViral Proteases

Identifiers

PMID25886260
PMCPMC4327787
OpenAlexW1976742892

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.