Evidence map›Paper›PMID 25885169›Full record

ArticlePLoS computational biology2015

Emergent systems energy laws for predicting myosin ensemble processivity.

Paul Egan, Jeffrey Moore, Christian Schunn, Jonathan Cagan, Philip LeDuc

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Robust mechanobiological behavior emerges in heterogeneous myosin systems.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  4. Article
  5. Article
  6. Optogenetic skeletal muscle-powered adaptive biological machines.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Paul EganDepartment of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.
Jeffrey MooreDepartment of Physiology and Biophysics, Boston University School of Medicine, Boston, Massachusetts, United States of America.
Christian SchunnDepartment of Psychology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.
Jonathan CaganDepartment of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.
Philip LeDucDepartment of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.
Carnegie Mellon University · USBoston University · USUniversity of Pittsburgh · US

Funding

Molecular Mechanics of Mutant Cardiac MyosinR01HL077280 · NHLBI · UNIVERSITY OF MASSACHUSETTS LOWELL · PI MOORE, JEFFREY R · 2005 to 2014
$3.3M
NHLBI NIH HHS R01 HL077280
6 · The paper itself

Abstract

In complex systems with stochastic components, systems laws often emerge that describe higher level behavior regardless of lower level component configurations. In this paper, emergent laws for describing mechanochemical systems are investigated for processive myosin-actin motility systems. On the basis of prior experimental evidence that longer processive lifetimes are enabled by larger myosin ensembles, it is hypothesized that emergent scaling laws could coincide with myosin-actin contact probability or system energy consumption. Because processivity is difficult to predict analytically and measure experimentally, agent-based computational techniques are developed to simulate processive myosin ensembles and produce novel processive lifetime measurements. It is demonstrated that only systems energy relationships hold regardless of isoform configurations or ensemble size, and a unified expression for predicting processive lifetime is revealed. The finding of such laws provides insight for how patterns emerge in stochastic mechanochemical systems, while also informing understanding and engineering of complex biological systems.

Indexed as

Models, MolecularBiomechanical PhenomenaComputational BiologyComputer SimulationMyosinsProtein IsoformsReproducibility of ResultsStochastic ProcessesMyosinsProtein Isoforms

Identifiers

PMID25885169
PMCPMC4401713
OpenAlexW1993793245

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.