Evidence map›Paper›PMID 25885058›Full record

ArticleBMC microbiology2015

CsrA impacts survival of Yersinia enterocolitica by affecting a myriad of physiological activities.

Karen LeGrand, Shane Petersen, Yan Zheng, Kang K Liu, Gulustan Ozturk, Jing-Yu Chen, Glenn M Young

Abstract read
In one paragraph

Article in BMC microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Discovering RNA-Based Regulatory Systems forFrontiers in cellular and infection microbiology · 2018
    Review
  7. Environmental Regulation of Yersinia Pathophysiology.Frontiers in cellular and infection microbiology · 2016
    Review
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Karen LeGrandMicrobiology Graduate Group, University of California, Davis, CA, USA. klegrand@ucdavis.edu.
Shane PetersenDepartment of Food Science and Technology, University of California, Davis, Davis, CA, USA. shane_petersen@bio-rad.com.
Yan ZhengDepartment of Food Science and Technology, University of California, Davis, Davis, CA, USA. zhengyan.ln.chn@gmail.com.
Kang K LiuDepartment of Food Science and Technology, University of California, Davis, Davis, CA, USA. liu_kang816@hotmail.com.
Gulustan OzturkDepartment of Food Science and Technology, University of California, Davis, Davis, CA, USA. gozturk@ucdavis.edu.
Jing-Yu ChenDepartment of Food Science and Technology, University of California, Davis, Davis, CA, USA. chenjy@cau.edu.cn.
Glenn M YoungMicrobiology Graduate Group, University of California, Davis, CA, USA. gmyoung@ucdavis.edu.

Funding

UC Davis Biology ProgramR25GM056765 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI GOMES, ALDRIN V. · 1998 to 2019
$9.7M
Animal Models of Infectious Diseases Training ProgramT32AI060555 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI MCSORLEY, STEPHEN J · 2004 to 2025
$3.3M
NK cell and interferon gamma deficiency in infant susceptibility to pertussisR21AI156042 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI CARBONETTI, NICHOLAS H · 2021 to 2022
$425k
NIAID NIH HHS R21 AI156042NIAID NIH HHS T32 AI060555NIGMS NIH HHS R25 GM056765
6 · The paper itself

Abstract

backgroundA previous study identified a Yersinia enterocolitica transposon mutant, GY448, that was unable to export the flagellar type three secretion system (T3SS)-dependent phospholipase, YplA. This strain was also deficient for motility and unable to form colonies on Lauria-Bertani agar medium. Preliminary analysis suggested it carried a mutation in csrA. CsrA in Escherichia coli is an RNA-binding protein that is involved in specific post-transcriptional regulation of a myriad of physiological activities. This study investigated how CsrA affects expression of the flagellar regulatory cascade that controls YplA export and motility. It also explored the effect of csrA mutation on Y. enterocolitica in response to conditions that cue physiological changes important for growth in environments found both in nature and the laboratory.

resultsThe precise location of the transposon insertion in GMY448 was mapped within csrA. Genetic complementation restored disruptions in motility and the YplA export phenotype (Yex), which confirmed this mutation disrupted CsrA function. Mutation of csrA affected expression of yplA and flagellar genes involved in flagellar T3SS dependent export and motility by altering expression of the master regulators flhDC. Mutation of csrA also resulted in increased sensitivity of Y. enterocolitica to various osmolytes, temperatures and antibiotics.

conclusionsThe results of this study reveal unique aspects of how CsrA functions in Y. enterocolitica to control its physiology. This provides perspective on how the Csr system is susceptible to adaptation to particular environments and bacterial lifestyles.

Indexed as

Gene Expression Regulation, BacterialMicrobial ViabilityStress, PhysiologicalFlagellaGene DeletionGenetic Complementation TestLocomotionOrganelle BiogenesisProtein TransportTranscription FactorsYersinia enterocoliticaTranscription Factors

Identifiers

PMID25885058
PMCPMC4336687

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.