Evidence map›Paper›PMID 25881040›Full record

ArticleBMC cell biology2015

Ex vivo analysis of renal proximal tubular cells.

David Legouis, Aurélien Bataille, Alexandre Hertig, Sophie Vandermeersch, Noémie Simon, Eric Rondeau, Pierre Galichon

Open access · goldAbstract read
In one paragraph

Article in BMC cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

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  16. Stress Response Gene Nupr1 Alleviates Cyclosporin A Nephrotoxicity In Vivo.Journal of the American Society of Nephrology : JASN · 2017
    Article
  17. Article
  18. Epigenetic changes during sepsis: on your marks!Critical care (London, England) · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

David LegouisINSERM, UMR-S1155, Paris, France. davidlegouis@gmail.com.
Aurélien BatailleINSERM, UMR-S1155, Paris, France. aurelbataille@gmail.com.
Alexandre HertigINSERM, UMR-S1155, Paris, France. alexandre.hertig@tnn.aphp.fr.
Sophie VandermeerschINSERM, UMR-S1155, Paris, France. sophie.vandermeersch@upmc.fr.
Noémie SimonINSERM, UMR-S1155, Paris, France. noemie.simon.tillaux@gmail.com.
Eric RondeauINSERM, UMR-S1155, Paris, France. eric.rondeau@tnn.aphp.fr.
Pierre GalichonINSERM, UMR-S1155, Paris, France. galichon@orange.fr.
Inserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExperimental models are inevitably a compromise between accurately reproducing a pathological situation and schematically simplifying it, which is intended to provide both relevance and conclusiveness. In-vivo models are very relevant, but multiple cell-types undergoing various changes may hinder the observation of individual molecular events.

resultsHere, we describe a method for analyzing and isolating specific cell types from the kidney and studying the phenotype they have acquired in vivo. Using flow cytometry, immunofluorescence, and RT-PCR, we show that our method is suitable for studying and isolating proximal tubular cells with an anti Prominin-1 antibody. Kidneys are subjected to mechanical dissociation followed by flow-cytometry analysis. Hundreds of thousands of proximal tubular cells are then isolated by magnetic separation followed by direct analysis or primary cell culture. Using our method, we detect phenotypic changes in the proximal tubular cells after renal ischemia reperfusion, and we isolate the proximal tubular cells, with a purity over 80%.

conclusionsThis method is efficient, quick, simple, and cheap, and should be useful for studying cell-type specific parameters after in vivo experimental studies. It is also a simple method to obtain a specific primary cell culture from any animal strain.

Indexed as

AC133 AntigenAnimalsAntibodiesAntigens, CDCells, CulturedCell SeparationFlow CytometryFluorescent Antibody TechniqueGlycoproteinsHyaluronan ReceptorsKidney Tubules, ProximalMiceMice, Inbred C57BLPeptidesPhenotypeAC133 AntigenAntibodiesAntigens, CDGlycoproteinsHyaluronan ReceptorsPeptidesProm1 protein, mouse

Identifiers

PMID25881040
PMCPMC4379601
OpenAlexW1998676124

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.