Evidence map›Paper›PMID 25880430›Full record

ArticleBMC genomics2015

Mitochondrial DNA and the Y chromosome suggest the settlement of Madagascar by Indonesian sea nomad populations.

Pradiptajati Kusuma, Murray P Cox, Denis Pierron, Harilanto Razafindrazaka, Nicolas Brucato, Laure Tonasso, Helena Loa Suryadi, Thierry Letellier, Herawati Sudoyo, François-Xavier Ricaut

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 131 citations in OpenAlex.

  1. Article
  2. Article
  3. Pharmacogenomics · 2022
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  4. Article
  5. Article
  6. Frontiers in pharmacology · 2021
    Article
  7. Article
  8. Dialects of Madagascar.PloS one · 2020
    Article
  9. Article
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  11. Article
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  15. Genomic landscape of human diversity across Madagascar.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Pradiptajati KusumaLaboratoire d'Anthropologie Moléculaire et Imagérie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France. pradiptajati.kusuma@univ-tlse3.fr.
Murray P CoxStatistics and Bioinformatics Group, Institute of Fundamental Sciences, Massey University, Palmerston North, New Zealand. m.p.cox@massey.ac.nz.
Denis PierronLaboratoire d'Anthropologie Moléculaire et Imagérie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France. denis.pierron@cnrs.fr.
Harilanto RazafindrazakaLaboratoire d'Anthropologie Moléculaire et Imagérie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France. razafindrazaka.harilanto@gmail.com.
Nicolas BrucatoCenter for Linguistics, University of Leiden, Leiden, Netherlands. nicolasbrucato@hotmail.fr.
Laure TonassoLaboratoire d'Anthropologie Moléculaire et Imagérie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France. laure.calviere-tonasso@univ-tlse3.fr.
Helena Loa SuryadiGenome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia. helena@eijkman.go.id.
Thierry LetellierLaboratoire d'Anthropologie Moléculaire et Imagérie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France. thierry.letellier@u-bordeaux2.fr.
Herawati SudoyoGenome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia. herawati@eijkman.go.id.
François-Xavier RicautLaboratoire d'Anthropologie Moléculaire et Imagérie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France. francois-xavier.ricaut@univ-tlse3.fr.
AMIS - Laboratoire d'anthropologie moléculaire et imagerie de synthèse · FREijkman Institute for Molecular Biology · IDUniversité Fédérale de Toulouse Midi-Pyrénées · FRLeiden University · NLMassey University · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLinguistic, cultural and genetic characteristics of the Malagasy suggest that both Africans and Island Southeast Asians were involved in the colonization of Madagascar. Populations from the Indonesian archipelago played an especially important role because linguistic evidence suggests that the Malagasy language branches from the Southeast Barito language family of southern Borneo, Indonesia, with the closest language spoken today by the Ma'anyan. To test for a genetic link between Malagasy and these linguistically related Indonesian populations, we studied the Ma'anyan and other Indonesian ethnic groups (including the sea nomad Bajo) that, from their historical and linguistic contexts, may be modern descendants of the populations that helped enact the settlement of Madagascar.

resultA combination of phylogeographic analysis of genetic distances, haplotype comparisons and inference of parental populations by linear optimization, using both maternal and paternal DNA lineages, suggests that Malagasy derive from multiple regional sources in Indonesia, with a focus on eastern Borneo, southern Sulawesi and the Lesser Sunda islands.

conclusionSettlement may have been mediated by ancient sea nomad movements because the linguistically closest population, Ma'anyan, has only subtle genetic connections to Malagasy, whereas genetic links with other sea nomads are more strongly supported. Our data hint at a more complex scenario for the Indonesian settlement of Madagascar than has previously been recognized.

Indexed as

Genetics, PopulationAsian PeopleChromosomes, Human, YDNA, MitochondrialGenetic LinkageGenotypeHaplotypesHumansIndonesiaMadagascarPhylogenyDNA, Mitochondrial

Identifiers

PMID25880430
PMCPMC4373124
OpenAlexW2000911646

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.