Evidence map›Paper›PMID 25880328›Full record

ArticleBMC infectious diseases2015

Variable performance of models for predicting methicillin-resistant Staphylococcus aureus carriage in European surgical wards.

Andie S Lee, Angelo Pan, Stephan Harbarth, Andrea Patroni, Annie Chalfine, George L Daikos, Silvia Garilli, José Antonio Martínez, Ben S Cooper, MOSAR-04 Study Team

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Trial
  2. Prospective surveillance of colonization and disease by methicillin-resistant Staphylococcus aureus (MRSA) at a European pediatric cancer center.Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer · 2022
    Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 8 countries.

Andie S LeeInfection Control Program, University of Geneva Hospitals and Faculty of Medicine, Geneva, Switzerland. andie.lee@live.com.au.
Angelo PanInfectious and Tropical Diseases Unit, Istituti Ospitalieri di Cremona, Cremona, Italy. angelo.pan1@tin.it.
Stephan HarbarthInfection Control Program, University of Geneva Hospitals and Faculty of Medicine, Geneva, Switzerland. stephan.harbarth@hcuge.ch.
Andrea PatroniGeneral Medicine Unit, Ospedale di Esine, Esine, Italy. andreapatroni@hotmail.com.
Annie ChalfineInfection Control Unit, Groupe Hospitalier Paris Saint-Joseph, Paris, France. achalfine@hpsj.fr.
George L DaikosFirst Department of Propaedeutic Medicine, Laiko General Hospital, Athens, Greece. gdaikos@med.uoa.gr.
Silvia GarilliInfectious and Tropical Diseases Unit, Istituti Ospitalieri di Cremona, Cremona, Italy. garillisilvia@libero.it.
José Antonio MartínezService of Infectious Diseases, Hospital Clinic de Barcelona, Barcelona, Spain. jamarti@clinic.ub.es.
Ben S CooperMahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand. ben.s.cooper@gmail.com.
MOSAR-04 Study Team
Istituti Ospitalieri di Cremona · ITHôpital Paris Saint-Joseph · FRHospital Clínic de Barcelona · ESLaiko General Hospital of Athens · GRNuffield Orthopaedic Centre · GBRoyal Prince Alfred Hospital · AUUniversity of Geneva · CH

Funding

Medical Research Council MR/K006924/1Wellcome TrustWellcome Trust 089275/Z/09/Z
6 · The paper itself

Abstract

backgroundPredictive models to identify unknown methicillin-resistant Staphylococcus aureus (MRSA) carriage on admission may optimise targeted MRSA screening and efficient use of resources. However, common approaches to model selection can result in overconfident estimates and poor predictive performance. We aimed to compare the performance of various models to predict previously unknown MRSA carriage on admission to surgical wards.

methodsThe study analysed data collected during a prospective cohort study which enrolled consecutive adult patients admitted to 13 surgical wards in 4 European hospitals. The participating hospitals were located in Athens (Greece), Barcelona (Spain), Cremona (Italy) and Paris (France). Universal admission MRSA screening was performed in the surgical wards. Data regarding demographic characteristics and potential risk factors for MRSA carriage were prospectively collected during the study period. Four logistic regression models were used to predict probabilities of unknown MRSA carriage using risk factor data: "Stepwise" (variables selected by backward elimination); "Best BMA" (model with highest posterior probability using Bayesian model averaging which accounts for uncertainty in model choice); "BMA" (average of all models selected with BMA); and "Simple" (model including variables selected >50% of the time by both Stepwise and BMA approaches applied to repeated random sub-samples of 50% of the data). To assess model performance, cross-validation against data not used for model fitting was conducted and net reclassification improvement (NRI) was calculated.

resultsOf 2,901 patients enrolled, 111 (3.8%) were newly identified MRSA carriers. Recent hospitalisation and presence of a wound/ulcer were significantly associated with MRSA carriage in all models. While all models demonstrated limited predictive ability (mean c-statistics <0.7) the Simple model consistently detected more MRSA-positive individuals despite screening fewer patients than the Stepwise model. Moreover, the Simple model improved reclassification of patients into appropriate risk strata compared with the Stepwise model (NRI 6.6%, P = .07).

conclusionsThough commonly used, models developed using stepwise variable selection can have relatively poor predictive value. When developing MRSA risk indices, simpler models, which account for uncertainty in model selection, may better stratify patients' risk of unknown MRSA carriage.

Indexed as

Hospital UnitsStatistics as TopicAdultAgedAged, 80 and overAge FactorsCarrier StateCohort StudiesDecision Support TechniquesFemaleGreeceHospitalizationHospitalsHumansItalyMale

Identifiers

PMID25880328
PMCPMC4347652
OpenAlexW2000613553

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.