Evidence map›Paper›PMID 25879820›Full record

ArticleJournal of translational medicine2015

A human immune data-informed vaccine concept elicits strong and broad T-cell specificities associated with HIV-1 control in mice and macaques.

Beatriz Mothe, Xintao Hu, Anuska Llano, Margherita Rosati, Alex Olvera, Viraj Kulkarni, Antonio Valentin, Candido Alicea, Guy R Pilkington, Niranjan Y Sardesai and 11 more

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 97 citations in OpenAlex.

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  9. Under the Radar: Immune Evasion, Pathogenesis and Control of HIV Infection.International journal of molecular sciences · 2025
    Review
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  12. Article
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  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. HIV T-cell immunogen design and delivery.Current opinion in HIV and AIDS · 2022
    Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 9 institutions in 3 countries.

Beatriz MotheIrsiCaixa AIDS Research Institute - HIVACAT, Hospital Germans Trias i Pujol, Crta Canyet s/n., 08916, Badalona, Barcelona, Spain. bmothe@irsicaixa.es.
Xintao HuHuman Retrovirus Pathogenesis Section, National Cancer Institute-Frederick, Frederick, MD, USA. xintao.hu@nih.gov.
Anuska LlanoIrsiCaixa AIDS Research Institute - HIVACAT, Hospital Germans Trias i Pujol, Crta Canyet s/n., 08916, Badalona, Barcelona, Spain. ALlano@irsicaixa.es.
Margherita RosatiHuman Retrovirus Section, National Cancer Institute-Frederick, Frederick, MD, USA. margherita.rosati@nih.gov.
Alex OlveraIrsiCaixa AIDS Research Institute - HIVACAT, Hospital Germans Trias i Pujol, Crta Canyet s/n., 08916, Badalona, Barcelona, Spain. aolvera@irsicaixa.es.
Viraj KulkarniHuman Retrovirus Pathogenesis Section, National Cancer Institute-Frederick, Frederick, MD, USA. kviraj@gmail.com.
Antonio ValentinHuman Retrovirus Section, National Cancer Institute-Frederick, Frederick, MD, USA. antonio.valentin@nih.gov.
Candido AliceaHuman Retrovirus Pathogenesis Section, National Cancer Institute-Frederick, Frederick, MD, USA. candido.alicea@nih.gov.
Guy R PilkingtonHuman Retrovirus Pathogenesis Section, National Cancer Institute-Frederick, Frederick, MD, USA. guy.pilkington@nih.gov.
Niranjan Y SardesaiInovio Pharmaceuticals Inc, Blue Bell, PA, USA. nsardesai@inovio.com.
Muntsa RocafortIrsiCaixa AIDS Research Institute - HIVACAT, Hospital Germans Trias i Pujol, Crta Canyet s/n., 08916, Badalona, Barcelona, Spain. mrocafort@irsicaixa.es.
Manel CrespoHIV Unit, Hospital de la Vall d'Hebrón, Barcelona, Spain. mcrespo@vhebron.net.
Jorge CarrilloIrsiCaixa AIDS Research Institute - HIVACAT, Hospital Germans Trias i Pujol, Crta Canyet s/n., 08916, Badalona, Barcelona, Spain. jcarrillo@irsicaixa.es.
Andrés MarcoCentres Penitenciaris BCN, Barcelona, Spain. amarco@aspb.cat.
James I MullinsUniversity of Washington, Seattle, WA, USA. jmullins@u.washington.edu.
Lucy DorrellNuffield Department of Medicine, University of Oxford, The John Radcliffe Hospital, Oxford, UK. lucy.dorrell@ndm.ox.ac.uk.
Tomáš HankeThe Jenner Institute, University of Oxford, Oxford, UK. tomas.hanke@ndm.ox.ac.uk.
Bonaventura ClotetIrsiCaixa AIDS Research Institute - HIVACAT, Hospital Germans Trias i Pujol, Crta Canyet s/n., 08916, Badalona, Barcelona, Spain. BClotet@irsicaixa.es.
George N PavlakisHuman Retrovirus Section, National Cancer Institute-Frederick, Frederick, MD, USA. george.pavlakis@nih.gov.
Barbara K FelberHuman Retrovirus Pathogenesis Section, National Cancer Institute-Frederick, Frederick, MD, USA. barbara.felber@nih.gov.
Christian BranderIrsiCaixa AIDS Research Institute - HIVACAT, Hospital Germans Trias i Pujol, Crta Canyet s/n., 08916, Badalona, Barcelona, Spain. cbrander@irsicaixa.es.
National Cancer Institute · USIrsiCaixa · ESInovio Pharmaceuticals (United States) · USJenner Institute · GBUniversitat Autònoma de Barcelona · ESUniversitat de Vic - Universitat Central de Catalunya · ESUniversity of Oxford · GBUniversity of Washington · USVall d'Hebron Hospital Universitari · ES

Funding

Prevention of AIDSZIABC010350 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FELBER, BARBARA K · 2009 to 2025
$30.0M
Immunotherapeutic Approaches for AIDSZIABC010749 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PAVLAKIS, GEORGE N. · 2009 to 2022
$21.6M
Viral Determinants of HIV-1 Transmission in African HeterosexualsP01AI057005 · NIAID · UNIVERSITY OF WASHINGTON · PI COREY, LAWRENCE · 2003 to 2014
$20.5M
Intramural NIH HHSMedical Research Council G1001757Medical Research Council MC_U137884179NIAID NIH HHS P01 AI057005NIAID NIH HHS P01AI057005
6 · The paper itself

Abstract

backgroundNone of the HIV T-cell vaccine candidates that have reached advanced clinical testing have been able to induce protective T cell immunity. A major reason for these failures may have been suboptimal T cell immunogen designs.

methodsTo overcome this problem, we used a novel immunogen design approach that is based on functional T cell response data from more than 1,000 HIV-1 clade B and C infected individuals and which aims to direct the T cell response to the most vulnerable sites of HIV-1.

resultsOur approach identified 16 regions in Gag, Pol, Vif and Nef that were relatively conserved and predominantly targeted by individuals with reduced viral loads. These regions formed the basis of the HIVACAT T-cell Immunogen (HTI) sequence which is 529 amino acids in length, includes more than 50 optimally defined CD4(+) and CD8(+) T-cell epitopes restricted by a wide range of HLA class I and II molecules and covers viral sites where mutations led to a dramatic reduction in viral replicative fitness. In both, C57BL/6 mice and Indian rhesus macaques immunized with an HTI-expressing DNA plasmid (DNA.HTI) induced broad and balanced T-cell responses to several segments within Gag, Pol, and Vif. DNA.HTI induced robust CD4(+) and CD8(+) T cell responses that were increased by a booster vaccination using modified virus Ankara (MVA.HTI), expanding the DNA.HTI induced response to up to 3.2% IFN-γ T-cells in macaques. HTI-specific T cells showed a central and effector memory phenotype with a significant fraction of the IFN-γ(+) CD8(+) T cells being Granzyme B(+) and able to degranulate (CD107a(+)).

conclusionsThese data demonstrate the immunogenicity of a novel HIV-1 T cell vaccine concept that induced broadly balanced responses to vulnerable sites of HIV-1 while avoiding the induction of responses to potential decoy targets that may divert effective T-cell responses towards variable and less protective viral determinants.

Indexed as

AIDS VaccinesAllelesAmino Acid SequenceAnimalsAntiviral AgentsCD4-Positive T-LymphocytesCohort StudiesEpitopesEpitopes, T-LymphocyteFemaleHaplotypesHEK293 CellsHistocompatibility Antigens Class IHIV-1HIV InfectionsHumansAIDS VaccinesAntiviral AgentsEpitopesEpitopes, T-LymphocyteHistocompatibility Antigens Class IPeptides

Identifiers

PMID25879820
PMCPMC4336696
OpenAlexW2140380019

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.