Evidence map›Paper›PMID 25878355›Full record

ArticleJournal of experimental botany2015

Molecular characterisation of four double-flowered mutants of Silene dioica representing four centuries of variation.

Elizabeth K S Ingle, Philip M Gilmartin

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 94% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Elizabeth K S IngleSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK John Innes Centre, Norwich Research Park, Colney Lane, Norwich NR4 7UH, UK.
Philip M GilmartinSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK John Innes Centre, Norwich Research Park, Colney Lane, Norwich NR4 7UH, UK p.gilmartin@uea.ac.uk.
Norwich Research Park · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Records of double-flowered Silene dioica date from the late sixteenth century and four named varieties are grown today, as previously, for their horticultural interest. Although double-flowered mutants have been characterized in several plants, their study in dioecious species is of particular interest due to influences of the homeotic mutation on the different floral whorl configurations in males and females. We have analysed four double-flowered varieties of Silene dioica: Flore Pleno and Rosea Plena date back to the seventeenth and nineteenth centuries, Thelma Kay and Firefly were recognized in the latter part of the twentieth and early twenty-first centuries. We have analysed the floral structure of the four varieties, which have distinct floral architectures. Based on Y chromosome-specific PCR analysis we show that Firefly is male and that the other three varieties are female: Random Amplification of Polymorphic DNA (RAPD) analyses suggested a common origin for the three female varieties. The double-flowered phenotype in all four varieties is caused by mutation of the C-function MADS-box transcription factor gene SDM1. We show that Firefly carries a unique 44bp insertion into SDM1, revealing an independent origin for this variety. Comparative analysis of SDM1 cDNA and genomic sequences in Flore Pleno, Rosea Plena and Thelma Kay shows that all three are caused by the same 7bp insertion within SDM1 and therefore share a common origin. The three alleles also differ by several single nucleotide polymorphisms, which represent somatic mutations accumulated over four centuries of asexual propagation.

Indexed as

AllelesAmino Acid SequenceBase SequenceFlowersHomeodomain ProteinsMolecular Sequence DataMutationPhenotypePlant ProteinsPolymorphism, Single NucleotideRandom Amplified Polymorphic DNA TechniqueSequence AlignmentSileneTranscription FactorsHomeodomain ProteinsPlant ProteinsTranscription FactorsC-function MADS-boxdioecydouble-floweredfloral homeotic mutationsex determinationSilene dioica.

Identifiers

PMID25878355
PMCPMC4449544
OpenAlexW2136782579

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.