Evidence map›Paper›PMID 25878247›Full record

ArticleThe Journal of biological chemistry2015

Assembly of the Elongin A Ubiquitin Ligase Is Regulated by Genotoxic and Other Stresses.

Juston C Weems, Brian D Slaughter, Jay R Unruh, Shawn M Hall, Merry B McLaird, Joshua M Gilmore, Michael P Washburn, Laurence Florens, Takashi Yasukawa, Teijiro Aso and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Structure of the transcribing RNA polymerase II-Elongin complex.Nature structural & molecular biology · 2023
    Article
  4. Science advances · 2023
    Article
  5. Review
  6. Review
  7. Human Protein-l-isoaspartateBiochemistry · 2022
    Article
  8. On the Interaction Between SMARCAL1 and BRG1.Frontiers in cell and developmental biology · 2022
    Article
  9. Article
  10. Article
  11. Review
  12. Driving integrative structural modeling with serial capture affinity purification.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Juston C WeemsFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110.
Brian D SlaughterFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110.
Jay R UnruhFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110.
Shawn M HallFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110.
Merry B McLairdFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110.
Joshua M GilmoreFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110.
Michael P WashburnFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110, the Departments of Pathology and Laboratory Medicine and.
Laurence FlorensFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110.
Takashi Yasukawathe Department of Functional Genomics, Kochi Medical School, Kohasu, Oko-cho, Nankoku, Kochi 783-8505, Japan.
Teijiro Asothe Department of Functional Genomics, Kochi Medical School, Kohasu, Oko-cho, Nankoku, Kochi 783-8505, Japan.
Joan W ConawayFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110, Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas 66160, and jlc@stowers.org.
Ronald C ConawayFrom the Stowers Institute for Medical Research, Kansas City, Missouri 64110, Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas 66160, and rcc@stowers.org.
Stowers Institute for Medical Research · USKōchi University · JPUniversity of Kansas · US

Funding

BIOCHEMISTRY OF EUKARYOTIC MESSENGER RNA SYNTHESISR37GM041628 · NIGMS · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI CONAWAY, RONALD C. · 2000 to 2009
$3.8M
BIOCHEMISTRY OF EUKARYOTIC MESSENGER SYNTHESISR01GM041628 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI CONAWAY, JOAN W, CONAWAY, RONALD C. · 1989 to 2013
$1.5M
NIGMS NIH HHS GM041628NIGMS NIH HHS R01 GM041628NIGMS NIH HHS R37 GM041628
6 · The paper itself

Abstract

Elongin A performs dual functions in cells as a component of RNA polymerase II (Pol II) transcription elongation factor Elongin and as the substrate recognition subunit of a Cullin-RING E3 ubiquitin ligase that has been shown to target Pol II stalled at sites of DNA damage. Here we investigate the mechanism(s) governing conversion of the Elongin complex from its elongation factor to its ubiquitin ligase form. We report the discovery that assembly of the Elongin A ubiquitin ligase is a tightly regulated process. In unstressed cells, Elongin A is predominately present as part of Pol II elongation factor Elongin. Assembly of Elongin A into the ubiquitin ligase is strongly induced by genotoxic stress; by transcriptional stresses that lead to accumulation of stalled Pol II; and by other stimuli, including endoplasmic reticulum and nutrient stress and retinoic acid signaling, that activate Elongin A-dependent transcription. Taken together, our findings shed new light on mechanisms that control the Elongin A ubiquitin ligase and suggest that it may play a role in Elongin A-dependent transcription.

Indexed as

Oxidative StressElonginFluorescence Resonance Energy TransferFluorescent Antibody Technique, IndirectHEK293 CellsHumansMutagensRNA, MessengerTranscription FactorsTretinoinUbiquitin-Protein LigasesUltraviolet RaysELOA protein, humanElonginMutagensRNA, MessengerTranscription FactorsTretinoinUbiquitin-Protein Ligasesconfocal microscopyendoplasmic reticulum stress (ER stress)fluorescence resonance energy transfer (FRET)gene transcriptionRNA polymerase IIstress responsetranscription elongation factorubiquitin ligase

Identifiers

PMID25878247
PMCPMC4463447
OpenAlexW2058074152

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.