Evidence map›Paper›PMID 25878100›Full record

ArticleJournal of virology2015

Glycan Microheterogeneity at the PGT135 Antibody Recognition Site on HIV-1 gp120 Reveals a Molecular Mechanism for Neutralization Resistance.

Laura K Pritchard, Daniel I R Spencer, Louise Royle, Snezana Vasiljevic, Stefanie A Krumm, Katie J Doores, Max Crispin

Abstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Protein and Glycan Mimicry in HIV Vaccine Design.Journal of molecular biology · 2019
    Review
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  11. Article
  12. Review
  13. Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Laura K PritchardOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford, United Kingdom.
Daniel I R SpencerLudger Ltd., Culham Science Centre, Abingdon, Oxfordshire, United Kingdom.
Louise RoyleLudger Ltd., Culham Science Centre, Abingdon, Oxfordshire, United Kingdom.
Snezana VasiljevicOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford, United Kingdom.
Stefanie A KrummKing's College London School of Medicine at Guy's, King's and St Thomas' Hospitals, Guy's Hospital, Great Maze Pond, London, United Kingdom.
Katie J DooresKing's College London School of Medicine at Guy's, King's and St Thomas' Hospitals, Guy's Hospital, Great Maze Pond, London, United Kingdom.
Max CrispinOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford, United Kingdom max.crispin@bioch.ox.ac.uk.

Funding

Support Component D/Vaccine Discovery, Concept to ClinicUM1AI100663 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BAROUCH, DAN H. · 2012 to 2018
$131.5M
Medical Research Council MR/K024426/1NIAID NIH HHS 1UM1AI100663NIAID NIH HHS UM1 AI100663
6 · The paper itself

Abstract

Broadly neutralizing antibodies have been isolated that bind the glycan shield of the HIV-1 envelope spike. One such antibody, PGT135, contacts the intrinsic mannose patch of gp120 at the Asn332, Asn392, and Asn386 glycosylation sites. Here, site-specific glycosylation analysis of recombinant gp120 revealed glycan microheterogeneity sufficient to explain the existence of a minor population of virions resistant to PGT135 neutralization. Target microheterogeneity and antibody glycan specificity are therefore important parameters in HIV-1 vaccine design.

Indexed as

Antibodies, NeutralizingHIV-1HIV AntibodiesHIV Envelope Protein gp120Immune EvasionPolysaccharidesAntibodies, Neutralizinggp120 protein, Human immunodeficiency virus 1HIV AntibodiesHIV Envelope Protein gp120Polysaccharides

Identifiers

PMID25878100
PMCPMC4468474

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.