Evidence map›Paper›PMID 25877913›Full record

ArticleArchives of virology2015

Evolutionary trends of European bat lyssavirus type 2 including genetic characterization of Finnish strains of human and bat origin 24 years apart.

Miia Jakava-Viljanen, Jakava-Viljanen Miia, Tiina Nokireki, Nokireki Tiina, Tarja Sironen, Sironen Tarja, Olli Vapalahti, Vapalahti Olli, Liisa Sihvonen, Sihvonen Liisa and 2 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Molecular Epidemiology and Evolution of European Bat Lyssavirus 2.International journal of molecular sciences · 2018
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Lyssavirus-reactive antibodies in Swedish bats.Infection ecology & epidemiology · 2016
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Miia Jakava-Viljanen
Jakava-Viljanen MiiaFinnish Food Safety Authority Evira, Mustialankatu 3, 00790, Helsinki, Finland.
Tiina Nokireki
Nokireki Tiina
Tarja Sironen
Sironen Tarja
Olli Vapalahti
Vapalahti Olli
Liisa Sihvonen
Sihvonen Liisa
Anita Huovilainen
Huovilainen Anita
Finnish Food Authority · FIUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among other Lyssaviruses, Daubenton's and pond-bat-related European bat lyssavirus type 2 (EBLV-2) can cause human rabies. To investigate the diversity and evolutionary trends of EBLV-2, complete genome sequences of two Finnish isolates were analysed. One originated from a human case in 1985, and the other originated from a bat in 2009. The overall nucleotide and deduced amino acid sequence identity of the two Finnish isolates were high, as well as the similarity to fully sequenced EBLV-2 strains originating from the UK and the Netherlands. In phylogenetic analysis, the EBLV-2 strains formed a monophyletic group that was separate from other bat-type lyssaviruses, with significant support. EBLV-2 shared the most recent common ancestry with Bokeloh bat lyssavirus (BBLV) and Khujan virus (KHUV). EBLV-2 showed limited diversity compared to RABV and appears to be well adapted to its host bat species. The slow tempo of viral evolution was evident in the estimations of divergence times for EBLV-2: the current diversity was estimated to have built up during the last 2000 years, and EBLV-2 diverged from KHUV about 8000 years ago. In a phylogenetic tree of partial N gene sequences, the Finnish EBLV-2 strains clustered with strains from Central Europe, supporting the hypothesis that EBLV-2 circulating in Finland might have a Central European origin. The Finnish EBLV-2 strains and a Swiss strain were estimated to have diverged from other EBLV-2 strains during the last 1000 years, and the two Finnish strains appear to have evolved from a common ancestor during the last 200 years.

Indexed as

Amino Acid SequenceAnimalsBase SequenceChiropteraEvolution, MolecularFinlandHumansLyssavirusMiceMolecular Sequence DataPhylogenyRabiesReverse Transcriptase Polymerase Chain Reaction

Identifiers

PMID25877913
PMCPMC4429142
OpenAlexW1998810142

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.