Evidence map›Paper›PMID 25877870›Full record

ArticleMolecular biology of the cell2015

The Ubp15 deubiquitinase promotes timely entry into S phase in Saccharomyces cerevisiae.

Denis Ostapenko, Janet L Burton, Mark J Solomon

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
  6. Who guards the guardian? Mechanisms that restrain APC/C during the cell cycle.Biochimica et biophysica acta. Molecular cell research · 2018
    Review
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Denis OstapenkoDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520-8114.
Janet L BurtonDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520-8114.
Mark J SolomonDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520-8114 Mark.Solomon@yale.edu.
Yale University · US

Funding

Biochemistry of Anaphase Promoting Complex-mediated UbiquitinationR01GM101044 · NIGMS · YALE UNIVERSITY · PI SOLOMON, MARK J · 2013 to 2016
$1.3M
NIGMS NIH HHS GM101044NIGMS NIH HHS R01 GM101044
6 · The paper itself

Abstract

The anaphase-promoting complex in partnership with its activator, Cdh1, is an E3 ubiquitin ligase responsible for targeting cell cycle proteins during G1 phase. In the budding yeast Saccharomyces cerevisiae, Cdh1 associates with the deubiquitinating enzyme Ubp15, but the significance of this interaction is unclear. To better understand the physiological role(s) of Ubp15, we examined cell cycle phenotypes of cells lacking Ubp15. We found that ubp15∆ cells exhibited delayed progression from G1 into S phase and increased sensitivity to the DNA synthesis inhibitor hydroxyurea. Both phenotypes of ubp15∆ cells were rescued by additional copies of the S-phase cyclin gene CLB5. Clb5 is an unstable protein targeted for proteasome-mediated degradation by several pathways. We found that during G1 phase, the APC(Cdh1)-mediated degradation of Clb5 was accelerated in ubp15∆ cells. Ubp15 interacted with Clb5 independent of Cdh1 and deubiquitinated Clb5 in a reconstituted system. Thus deubiquitination by Ubp15 counteracts APC activity toward cyclin Clb5 to allow Clb5 accumulation and a timely entry into S phase.

Indexed as

Cdh1 ProteinsCyclin BEndopeptidasesG1 Phase Cell Cycle CheckpointsMutationProtein Processing, Post-TranslationalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitin-Specific ProteasesCdh1 ProteinsCDH1 protein, S cerevisiaeCLB5 protein, S cerevisiaeCyclin BEndopeptidasesSaccharomyces cerevisiae ProteinsUbiquitin-Specific ProteasesUbp15 protein, S cerevisiae

Identifiers

PMID25877870
PMCPMC4462939
OpenAlexW2405354397

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.