Evidence map›Paper›PMID 25877793›Full record

ArticleMicrobial ecology2015

Coupling Between and Among Ammonia Oxidizers and Nitrite Oxidizers in Grassland Mesocosms Submitted to Elevated CO2 and Nitrogen Supply.

Marie Simonin, Xavier Le Roux, Franck Poly, Catherine Lerondelle, Bruce A Hungate, Naoise Nunan, Audrey Niboyet

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 71 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Marie SimoninInstitute of Ecology and Environmental Sciences - Paris, UMR 7618 Université Pierre et Marie Curie/CNRS/AgroParisTech, 78850, Thiverval Grignon, France.
Xavier Le RouxMicrobial Ecology Center, Université de Lyon/Université Lyon 1/CNRS/INRA, UMR CNRS 5557, USC INRA 1364, 69622, Villeurbanne, France.
Franck PolyMicrobial Ecology Center, Université de Lyon/Université Lyon 1/CNRS/INRA, UMR CNRS 5557, USC INRA 1364, 69622, Villeurbanne, France.
Catherine LerondelleMicrobial Ecology Center, Université de Lyon/Université Lyon 1/CNRS/INRA, UMR CNRS 5557, USC INRA 1364, 69622, Villeurbanne, France.
Bruce A HungateCenter for Ecosystem Science and Society and Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, 86011, USA.
Naoise NunanInstitute of Ecology and Environmental Sciences - Paris, UMR 7618 Université Pierre et Marie Curie/CNRS/AgroParisTech, 78850, Thiverval Grignon, France.
Audrey NiboyetInstitute of Ecology and Environmental Sciences - Paris, UMR 7618 Université Pierre et Marie Curie/CNRS/AgroParisTech, 78850, Thiverval Grignon, France. audrey.niboyet@grignon.inra.fr.
Université Claude Bernard Lyon 1 · FRCentre National de la Recherche Scientifique · FRNorthern Arizona University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many studies have assessed the responses of soil microbial functional groups to increases in atmospheric CO2 or N deposition alone and more rarely in combination. However, the effects of elevated CO2 and N on the (de)coupling between different microbial functional groups (e.g., different groups of nitrifiers) have been barely studied, despite potential consequences for ecosystem functioning. Here, we investigated the short-term combined effects of elevated CO2 and N supply on the abundances of the four main microbial groups involved in soil nitrification: ammonia-oxidizing archaea (AOA), ammonia-oxidizing bacteria (AOB), and nitrite-oxidizing bacteria (belonging to the genera Nitrobacter and Nitrospira) in grassland mesocosms. AOB and AOA abundances responded differently to the treatments: N addition increased AOB abundance, but did not alter AOA abundance. Nitrobacter and Nitrospira abundances also showed contrasted responses to the treatments: N addition increased Nitrobacter abundance, but decreased Nitrospira abundance. Our results support the idea of a niche differentiation between AOB and AOA, and between Nitrobacter and Nitrospira. AOB and Nitrobacter were both promoted at high N and C conditions (and low soil water content for Nitrobacter), while AOA and Nitrospira were favored at low N and C conditions (and high soil water content for Nitrospira). In addition, Nitrobacter abundance was positively correlated to AOB abundance and Nitrospira abundance to AOA abundance. Our results suggest that the couplings between ammonia and nitrite oxidizers are influenced by soil N availability. Multiple environmental changes may thus elicit rapid and contrasted responses between and among the soil ammonia and nitrite oxidizers due to their different ecological requirements.

Indexed as

NitrificationSoil MicrobiologyAmmoniaBacteriaCarbon DioxideDactylisGrasslandNitritesNitrogenOxidation-ReductionAmmoniaCarbon DioxideNitritesNitrogenAmmonia oxidizersGlobal changeGrasslandsNiche differentiationNitrificationNitrite oxidizers

Identifiers

PMID25877793
OpenAlexW2067276296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.