Evidence map›Paper›PMID 25875953›Full record

ArticlePLoS pathogens2015

Structural determinants of phenotypic diversity and replication rate of human prions.

Jiri G Safar, Xiangzhu Xiao, Mohammad E Kabir, Shugui Chen, Chae Kim, Tracy Haldiman, Yvonne Cohen, Wei Chen, Mark L Cohen, Witold K Surewicz

Abstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Propagation of PrPCommunications biology · 2023
    Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jiri G SafarDepartment of Pathology, Case Western Reserve University, Cleveland, Ohio, United States of America; Department of Neurology, Case Western Reserve University, Cleveland, Ohio, United States of America; National Prion Disease Pathology Surveillance Center, Case Western Reserve University, Cleveland, Ohio, United States of America.
Xiangzhu XiaoDepartment of Physiology and Biophysics, Case Western Reserve University, Cleveland, Ohio, United States of America.
Mohammad E KabirDepartment of Pathology, Case Western Reserve University, Cleveland, Ohio, United States of America.
Shugui ChenDepartment of Physiology and Biophysics, Case Western Reserve University, Cleveland, Ohio, United States of America.
Chae KimDepartment of Pathology, Case Western Reserve University, Cleveland, Ohio, United States of America.
Tracy HaldimanDepartment of Pathology, Case Western Reserve University, Cleveland, Ohio, United States of America.
Yvonne CohenNational Prion Disease Pathology Surveillance Center, Case Western Reserve University, Cleveland, Ohio, United States of America.
Wei ChenNational Prion Disease Pathology Surveillance Center, Case Western Reserve University, Cleveland, Ohio, United States of America.
Mark L CohenDepartment of Pathology, Case Western Reserve University, Cleveland, Ohio, United States of America; National Prion Disease Pathology Surveillance Center, Case Western Reserve University, Cleveland, Ohio, United States of America.
Witold K SurewiczDepartment of Physiology and Biophysics, Case Western Reserve University, Cleveland, Ohio, United States of America.

Funding

Replication mechanism of human prionsR01NS074317 · NINDS · CASE WESTERN RESERVE UNIVERSITY · PI SAFAR, JIRI G., SUREWICZ, WITOLD K · 2011 to 2015
$2.6M
NINDS NIH HHS NS074317NINDS NIH HHS R01 NS074317PHS HHS UR8/CCU515004
6 · The paper itself

Abstract

The infectious pathogen responsible for prion diseases is the misfolded, aggregated form of the prion protein, PrPSc. In contrast to recent progress in studies of laboratory rodent-adapted prions, current understanding of the molecular basis of human prion diseases and, especially, their vast phenotypic diversity is very limited. Here, we have purified proteinase resistant PrPSc aggregates from two major phenotypes of sporadic Creutzfeldt-Jakob disease (sCJD), determined their conformational stability and replication tempo in vitro, as well as characterized structural organization using recently emerged approaches based on hydrogen/deuterium (H/D) exchange coupled with mass spectrometry. Our data clearly demonstrate that these phenotypically distant prions differ in a major way with regard to their structural organization, both at the level of the polypeptide backbone (as indicated by backbone amide H/D exchange data) as well as the quaternary packing arrangements (as indicated by H/D exchange kinetics for histidine side chains). Furthermore, these data indicate that, in contrast to previous observations on yeast and some murine prion strains, the replication rate of sCJD prions is primarily determined not by conformational stability but by specific structural features that control the growth rate of prion protein aggregates.

Indexed as

Creutzfeldt-Jakob SyndromeBlotting, WesternHumansImmunoassayMass SpectrometryPhenotypeProtein StabilityProtein Structure, QuaternaryPrPSc ProteinsPrPSc Proteins

Identifiers

PMID25875953
PMCPMC4397081

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.