Evidence map›Paper›PMID 25873925›Full record

ReviewFrontiers in plant science2015

How plants manage food reserves at night: quantitative models and open questions.

Antonio Scialdone, Martin Howard

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Time to start taking time seriously: how to investigate unexpected biological rhythms within infectious disease research.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Analysis of Global Gene Expression in Maize (Plants (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Antonio ScialdoneWellcome Trust Sanger Institute, Wellcome Trust Genome Campus Hinxton, Cambridge, UK ; European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus Hinxton, Cambridge, UK.
Martin HowardComputational and Systems Biology, John Innes Centre Norwich, UK.
John Innes Centre · GBWellcome Sanger Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/000C0620
6 · The paper itself

Abstract

In order to cope with night-time darkness, plants during the day allocate part of their photosynthate for storage, often as starch. This stored reserve is then degraded at night to sustain metabolism and growth. However, night-time starch degradation must be tightly controlled, as over-rapid turnover results in premature depletion of starch before dawn, leading to starvation. Recent experiments in Arabidopsis have shown that starch degradation proceeds at a constant rate during the night and is set such that starch reserves are exhausted almost precisely at dawn. Intriguingly, this pattern is robust with the degradation rate being adjusted to compensate for unexpected changes in the time of darkness onset. While a fundamental role for the circadian clock is well-established, the underlying mechanisms controlling starch degradation remain poorly characterized. Here, we discuss recent quantitative models that have been proposed to explain how plants can compute the appropriate starch degradation rate, a process that requires an effective arithmetic division calculation. We review experimental confirmation of the models, and describe aspects that require further investigation. Overall, the process of night-time starch degradation necessitates a fundamental metabolic role for the circadian clock and, more generally, highlights how cells process information in order to optimally manage their resources.

Indexed as

Arabidopsis thalianacircadian clockmathematical modelingpost-translational analog arithmeticstarch degradation

Identifiers

PMID25873925
PMCPMC4379750
OpenAlexW2006400373

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.