Evidence map›Paper›PMID 25870109›Full record

ArticleMolecular and cellular biology2015

TAF10 Interacts with the GATA1 Transcription Factor and Controls Mouse Erythropoiesis.

Petros Papadopoulos, Laura Gutiérrez, Jeroen Demmers, Elisabeth Scheer, Farzin Pourfarzad, Dimitris N Papageorgiou, Elena Karkoulia, John Strouboulis, Harmen J G van de Werken, Reinier van der Linden and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

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  12. What do Transcription Factors Interact With?Journal of molecular biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 4 countries.

Petros PapadopoulosDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands Center for Human Genetics, KU Leuven, Leuven, Belgium petros.papadopoulos@med.kuleuven.be laszlo@igbmc.fr.
Laura GutiérrezDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands Department of Blood Cell Research, Sanquin Research and Landsteiner Laboratory, AMC, Amsterdam, The Netherlands.
Jeroen DemmersProteomics Center, Erasmus MC, Rotterdam, The Netherlands.
Elisabeth ScheerCellular Signaling and Nuclear Dynamics Program, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), UMR 7104 CNRS, INSERM U964, Université de Strasbourg, Illkirch, France.
Farzin PourfarzadDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands Department of Blood Cell Research, Sanquin Research and Landsteiner Laboratory, AMC, Amsterdam, The Netherlands.
Dimitris N PapageorgiouDivision of Molecular Oncology, B.S.R.C. Alexander Fleming, Athens, Greece.
Elena KarkouliaDivision of Molecular Oncology, B.S.R.C. Alexander Fleming, Athens, Greece.
John StrouboulisDivision of Molecular Oncology, B.S.R.C. Alexander Fleming, Athens, Greece.
Harmen J G van de WerkenDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Reinier van der LindenDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Peter VandenbergheCenter for Human Genetics, KU Leuven, Leuven, Belgium.
Dick H W DekkersProteomics Center, Erasmus MC, Rotterdam, The Netherlands.
Sjaak PhilipsenDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Frank GrosveldDepartment of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
Làszlò ToraCellular Signaling and Nuclear Dynamics Program, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), UMR 7104 CNRS, INSERM U964, Université de Strasbourg, Illkirch, France petros.papadopoulos@med.kuleuven.be laszlo@igbmc.fr.
Erasmus University Rotterdam · NLAlexander Fleming Biomedical Sciences Research Center · GRErasmus MC · NLKU Leuven · BEInserm · FRInstitut de génétique et de biologie moléculaire et cellulaire · FRSanquin · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ordered assembly of a functional preinitiation complex (PIC), composed of general transcription factors (GTFs), is a prerequisite for the transcription of protein-coding genes by RNA polymerase II. TFIID, comprised of the TATA binding protein (TBP) and 13 TBP-associated factors (TAFs), is the GTF that is thought to recognize the promoter sequences allowing site-specific PIC assembly. Transcriptional cofactors, such as SAGA, are also necessary for tightly regulated transcription initiation. The contribution of the two TAF10-containing complexes (TFIID, SAGA) to erythropoiesis remains elusive. By ablating TAF10 specifically in erythroid cells in vivo, we observed a differentiation block accompanied by deregulated GATA1 target genes, including Gata1 itself, suggesting functional cross talk between GATA1 and TAF10. Additionally, we analyzed by mass spectrometry the composition of TFIID and SAGA complexes in mouse and human cells and found that their global integrity is maintained, with minor changes, during erythroid cell differentiation and development. In agreement with our functional data, we show that TAF10 interacts directly with GATA1 and that TAF10 is enriched on the GATA1 locus in human fetal erythroid cells. Thus, our findings demonstrate a cross talk between canonical TFIID and SAGA complexes and cell-specific transcription activators during development and differentiation.

Indexed as

ErythropoiesisAnimalsErythroid CellsGATA1 Transcription FactorGene Expression Regulation, DevelopmentalGene Knockout TechniquesGenetic LociHumansMiceMice, KnockoutProtein Interaction MappingTATA-Binding Protein Associated FactorsTranscription Factor TFIIDGATA1 Transcription FactorTAF10 protein, mouseTATA-Binding Protein Associated FactorsTranscription Factor TFIID

Identifiers

PMID25870109
PMCPMC4438247
OpenAlexW2075306500

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.