Evidence map›Paper›PMID 25869652›Full record

ArticlePlant physiology2015

The Arabidopsis MYB96 Transcription Factor Is a Positive Regulator of ABSCISIC ACID-INSENSITIVE4 in the Control of Seed Germination.

Kyounghee Lee, Hong Gil Lee, Seongmun Yoon, Hyun Uk Kim, Pil Joon Seo

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
9.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 82 citations in OpenAlex.

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  11. International journal of molecular sciences · 2024
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  15. BASIC PENTACYSTEINE1 regulatesFrontiers in plant science · 2024
    Article
  16. Article
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  19. Underlying Biochemical and Molecular Mechanisms for Seed Germination.International journal of molecular sciences · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Kyounghee LeeDepartment of Bioactive Material Sciences and Research Center of Bioactive Materials (K.L., H.G.L., P.J.S.) and Department of Chemistry and Research Institute of Physics and Chemistry (P.J.S.), Chonbuk National University, Jeonju 561-756, Republic of Korea; andDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, Jeonju 560-500, Republic of Korea (S.Y., H.U.K.).
Hong Gil LeeDepartment of Bioactive Material Sciences and Research Center of Bioactive Materials (K.L., H.G.L., P.J.S.) and Department of Chemistry and Research Institute of Physics and Chemistry (P.J.S.), Chonbuk National University, Jeonju 561-756, Republic of Korea; andDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, Jeonju 560-500, Republic of Korea (S.Y., H.U.K.).
Seongmun YoonDepartment of Bioactive Material Sciences and Research Center of Bioactive Materials (K.L., H.G.L., P.J.S.) and Department of Chemistry and Research Institute of Physics and Chemistry (P.J.S.), Chonbuk National University, Jeonju 561-756, Republic of Korea; andDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, Jeonju 560-500, Republic of Korea (S.Y., H.U.K.).ORCID http://orcid.org/0000-0001-7263-8036
Hyun Uk KimDepartment of Bioactive Material Sciences and Research Center of Bioactive Materials (K.L., H.G.L., P.J.S.) and Department of Chemistry and Research Institute of Physics and Chemistry (P.J.S.), Chonbuk National University, Jeonju 561-756, Republic of Korea; andDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, Jeonju 560-500, Republic of Korea (S.Y., H.U.K.).
Pil Joon SeoDepartment of Bioactive Material Sciences and Research Center of Bioactive Materials (K.L., H.G.L., P.J.S.) and Department of Chemistry and Research Institute of Physics and Chemistry (P.J.S.), Chonbuk National University, Jeonju 561-756, Republic of Korea; andDepartment of Agricultural Biotechnology, National Academy of Agricultural Science, Rural Development Administration, Jeonju 560-500, Republic of Korea (S.Y., H.U.K.) pjseo1@jbnu.ac.kr.
Rural Development Administration · KRJeonbuk National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seed germination is a key developmental transition that initiates the plant life cycle. The timing of germination is determined by the coordinated action of two phytohormones, gibberellin and abscisic acid (ABA). In particular, ABA plays a key role in integrating environmental information and inhibiting the germination process. The utilization of embryonic lipid reserves contributes to seed germination by acting as an energy source, and ABA suppresses lipid degradation to modulate the germination process. Here, we report that the ABA-responsive R2R3-type MYB transcription factor MYB96, which is highly expressed in embryo, regulates seed germination by controlling the expression of abscisic acid-insensitive4 (ABI4) in Arabidopsis (Arabidopsis thaliana). In the presence of ABA, germination was accelerated in MYB96-deficient myb96-1 seeds, whereas the process was significantly delayed in MYB96-overexpressing activation-tagging myb96-ox seeds. Consistently, myb96-1 seeds degraded a larger extent of lipid reserves even in the presence of ABA, while reduced lipid mobilization was observed in myb96-ox seeds. MYB96 directly regulates ABI4, which acts as a repressor of lipid breakdown, to define its spatial and temporal expression. Genetic analysis further demonstrated that ABI4 is epistatic to MYB96 in the control of seed germination. Taken together, the MYB96-ABI4 module regulates lipid mobilization specifically in the embryo to ensure proper seed germination under suboptimal conditions.

Indexed as

GerminationAbscisic AcidArabidopsisArabidopsis ProteinsEpistasis, GeneticGene Expression Regulation, PlantGibberellinsMutationPromoter Regions, GeneticProtein BindingSeedsTranscription FactorsTriglyceridesUp-RegulationABI4 protein, ArabidopsisAbscisic AcidArabidopsis ProteinsGibberellinsMYB96 protein, ArabidopsisTranscription FactorsTriglycerides

Identifiers

PMID25869652
PMCPMC4453784
OpenAlexW1529619133

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.