Evidence map›Paper›PMID 25869015›Full record

ArticleThe pharmacogenomics journal2016

Clinical validity of new genetic biomarkers of irinotecan neutropenia: an independent replication study.

D J Crona, J Ramirez, W Qiao, A-J de Graan, M J Ratain, R H N van Schaik, R H J Mathijssen, G L Rosner, F Innocenti

Open access · bronzeAbstract read
In one paragraph

Article in The pharmacogenomics journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Guideline
  2. Trial
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  6. Article
  7. RevisitingJCO oncology practice · 2022
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  14. Genotype-Guided Dosing Study of FOLFIRI plus Bevacizumab in Patients with Metastatic Colorectal Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 2 countries.

D J CronaUniversity of North Carolina Center for Pharmacogenomics and Individualized Therapy, Eshelman School of Pharmacy, Division of Pharmacotherapy and Experimental Therapeutics, Chapel Hill, NC, USA.
J RamirezUniversity of Chicago, Department of Medicine, Chicago, IL, USA.
W QiaoMD Anderson Cancer Center, The University of Texas, Division of Quantitative Sciences, Houston, TX, USA.
A-J de GraanErasmus University Medical Center, Erasmus MC Cancer Institute, Department of Medical Oncology, Rotterdam, The Netherlands.
M J RatainUniversity of Chicago, Department of Medicine, Chicago, IL, USA.
R H N van SchaikErasmus University Medical Center, Erasmus MC Cancer Institute, Department of Clinical Chemistry, Rotterdam, The Netherlands.
R H J MathijssenErasmus University Medical Center, Erasmus MC Cancer Institute, Department of Medical Oncology, Rotterdam, The Netherlands.
G L RosnerThe Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, Johns Hopkins University School of Medicine, Department of Oncology, Baltimore, MD, USA.
F InnocentiUniversity of North Carolina Center for Pharmacogenomics and Individualized Therapy, Eshelman School of Pharmacy, Division of Pharmacotherapy and Experimental Therapeutics, Chapel Hill, NC, USA.
Erasmus MC Cancer Institute · NLUniversity of Chicago · USErasmus MC · NLJohns Hopkins University · USThe University of Texas MD Anderson Cancer Center · USUNC Lineberger Comprehensive Cancer CenterUniversity of North Carolina at Chapel Hill · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Kathrin Milbury · 1985 to 2026
$290.8M
Translational Research Central ServicesP30CA006973 · NCI · JOHNS HOPKINS UNIVERSITY · PI Rosalie Wollett · 1985 to 2026
$208.6M
Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI David Darr · 1985 to 2026
$201.5M
Whole GenomeU01GM061393 · NIGMS · UNIVERSITY OF CHICAGO · PI COX, NANCY J, DOLAN, MARY EILEEN · 2000 to 2014
$39.0M
UNC-Duke Collaborative Clinical Pharmacology Postdoctoral Training Program-Evaluation SupplementT32GM086330 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KIM L.R. BROUWER, Daniel Gonzalez · 2011 to 2026
$8.5M
Genome-Wide molecular epidemiology of treatment outcome and cancer riskK07CA140390 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI INNOCENTI, FEDERICO · 2009 to 2013
$648k
NCI NIH HHS K07 CA140390NCI NIH HHS K07CA140390-01NCI NIH HHS P30 CA006973NCI NIH HHS P30 CA016086NCI NIH HHS P30 CA016672NIGMS NIH HHS T32 GM086330NIGMS NIH HHS T32GM086330NIGMS NIH HHS U01 GM061393NIGMS NIH HHS U01GM61393
6 · The paper itself

Abstract

The overall goal of this study was to provide evidence for the clinical validity of nine genetic variants in five genes previously associated with irinotecan neutropenia and pharmacokinetics. Variants associated with absolute neutrophil count (ANC) nadir and/or irinotecan pharmacokinetics in a discovery cohort of cancer patients were genotyped in an independent replication cohort of 108 cancer patients. Patients received single-agent irinotecan every 3 weeks. For ANC nadir, we replicated UGT1A1*28, UGT1A1*93 and SLCO1B1*1b in univariate analyses. For irinotecan area under the concentration-time curve (AUC0-24), we replicated ABCC2 -24C>T; however, ABCC2 -24C>T only predicted a small fraction of the variance. For SN-38 AUC0-24 and the glucuronidation ratio, we replicated UGT1A1*28 and UGT1A1*93. In addition to UGT1A1*28, this study independently validated UGT1A1*93 and SLCO1B1*1b as new predictors of irinotecan neutropenia. Further demonstration of their clinical utility will optimize irinotecan therapy in cancer patients.

Indexed as

Genetic MarkersAdultAgedAged, 80 and overAntineoplastic AgentsCamptothecinCohort StudiesFemaleGenotypeHumansIrinotecanMaleMiddle AgedMultidrug Resistance-Associated Protein 2NeoplasmsNeutropeniaABCC2 protein, humanAntineoplastic AgentsCamptothecinGenetic MarkersIrinotecanMultidrug Resistance-Associated Protein 2

Identifiers

PMID25869015
PMCPMC4729652
OpenAlexW2035656574

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.