Evidence map›Paper›PMID 25867597›Full record

ArticleJournal of visualized experiments : JoVE2015

Mosaic zebrafish transgenesis for functional genomic analysis of candidate cooperative genes in tumor pathogenesis.

Choong Yong Ung, Feng Guo, Xiaoling Zhang, Zhihui Zhu, Shizhen Zhu

Open access · bronzeAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact, top 94% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Zebrafish Model of Neuroblastoma Metastasis.Journal of visualized experiments : JoVE · 2021
    Article
  4. Review
  5. Article
  6. Construction of irf4a Transgenic Zebrafish Using Tol2 System and Its Potential Application.Dose-response : a publication of International Hormesis Society
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Choong Yong UngDepartment of Molecular Pharmacology & Experimental Therapeutics, Mayo Clinic College of Medicine, Center for Individualized Medicine.
Feng GuoTufts University School of Medicine.
Xiaoling ZhangDepartment of Biochemistry and Molecular Biology, Mayo Clinic.
Zhihui ZhuDepartment of Biochemistry and Molecular Biology, Mayo Clinic.
Shizhen ZhuDepartment of Molecular Pharmacology & Experimental Therapeutics, Mayo Clinic College of Medicine, Center for Individualized Medicine; Department of Biochemistry and Molecular Biology, Mayo Clinic; Zhu.Shizhen@mayo.edu.
WinnMed · USMayo Clinic · USTufts University · US

Funding

Pathogenic Roles of SHP2 & PTPRD Tyrosine Phosphatases in High-Risk NeuroblastomaR00CA178189 · NCI · MAYO CLINIC ROCHESTER · PI ZHU, SHIZHEN · 2015 to 2017
$747k
Pathogenic Roles of SHP2 & PTPRD Tyrosine Phosphatases in High-Risk NeuroblastomaK99CA178189 · NCI · MAYO CLINIC ROCHESTER · PI ZHU, SHIZHEN · 2013 to 2014
$245k
NCI NIH HHS 1K99CA178189-01NCI NIH HHS K99 CA178189NCI NIH HHS R00 CA178189
6 · The paper itself

Abstract

Comprehensive genomic analysis has uncovered surprisingly large numbers of genetic alterations in various types of cancers. To robustly and efficiently identify oncogenic "drivers" among these tumors and define their complex relationships with concurrent genetic alterations during tumor pathogenesis remains a daunting task. Recently, zebrafish have emerged as an important animal model for studying human diseases, largely because of their ease of maintenance, high fecundity, obvious advantages for in vivo imaging, high conservation of oncogenes and their molecular pathways, susceptibility to tumorigenesis and, most importantly, the availability of transgenic techniques suitable for use in the fish. Transgenic zebrafish models of cancer have been widely used to dissect oncogenic pathways in diverse tumor types. However, developing a stable transgenic fish model is both tedious and time-consuming, and it is even more difficult and more time-consuming to dissect the cooperation of multiple genes in disease pathogenesis using this approach, which requires the generation of multiple transgenic lines with overexpression of the individual genes of interest followed by complicated breeding of these stable transgenic lines. Hence, use of a mosaic transient transgenic approach in zebrafish offers unique advantages for functional genomic analysis in vivo. Briefly, candidate transgenes can be coinjected into one-cell-stage wild-type or transgenic zebrafish embryos and allowed to integrate together into each somatic cell in a mosaic pattern that leads to mixed genotypes in the same primarily injected animal. This permits one to investigate in a faster and less expensive manner whether and how the candidate genes can collaborate with each other to drive tumorigenesis. By transient overexpression of activated ALK in the transgenic fish overexpressing MYCN, we demonstrate here the cooperation of these two oncogenes in the pathogenesis of a pediatric cancer, neuroblastoma that has resisted most forms of contemporary treatment.

Indexed as

Gene Transfer TechniquesOncogenesAnaplastic Lymphoma KinaseAnimalsAnimals, Genetically ModifiedCell Transformation, NeoplasticDisease Models, AnimalHumansLuminescent ProteinsNeuroblastomaReceptor Protein-Tyrosine KinasesRed Fluorescent ProteinTransgenesZebrafishALK protein, humanAnaplastic Lymphoma KinaseLuminescent ProteinsReceptor Protein-Tyrosine KinasesRed Fluorescent Protein

Identifiers

PMID25867597
PMCPMC4401404
OpenAlexW2093930734

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.