Evidence map›Paper›PMID 25866930›Full record

ArticleJournal of visualized experiments : JoVE2015

Ex utero electroporation and organotypic slice culture of mouse hippocampal tissue.

Sathish Venkataramanappa, Ruth Simon, Stefan Britsch

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In one paragraph

Article in Journal of visualized experiments : JoVE, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sathish VenkataramanappaInstitute of Molecular and Cellular Anatomy, University of Ulm.
Ruth SimonInstitute of Molecular and Cellular Anatomy, University of Ulm; ruth.simon@uni-ulm.de.
Stefan BritschInstitute of Molecular and Cellular Anatomy, University of Ulm.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mouse genetics offers a powerful tool determining the role of specific genes during development. Analyzing the resulting phenotypes by immunohistochemical and molecular methods provides information of potential target genes and signaling pathways. To further elucidate specific regulatory mechanisms requires a system allowing the manipulation of only a small number of cells of a specific tissue by either overexpression, ablation or re-introduction of specific genes and follow their fate during development. To achieve this ex utero electroporation of hippocampal structures, especially the dentate gyrus, followed by organotypic slice culture provides such a tool. Using this system to generate mosaic deletions allows determining whether the gene of interest regulates cell-autonomously developmental processes like progenitor cell proliferation or neuronal differentiation. Furthermore it facilitates the rescue of phenotypes by re-introducing the deleted gene or its target genes. In contrast to in utero electroporation the ex utero approach improves the rate of successfully targeting deeper layers of the brain like the dentate gyrus. Overall ex utero electroporation and organotypic slice culture provide a potent tool to study regulatory mechanisms in a semi-native environment mirroring endogenous conditions.

Indexed as

AnimalsDentate GyrusDesmoplakinsDown-RegulationElectroporationFemaleGene Expression Regulation, DevelopmentalMiceOrgan Culture TechniquesPregnancyRepressor ProteinsSingle-Cell AnalysisTumor Suppressor ProteinsUp-RegulationBcl11b protein, mouseDesmoplakinsDsp protein, mouseRepressor ProteinsTumor Suppressor Proteins

Identifiers

PMID25866930
PMCPMC4401203

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.