Evidence map›Paper›PMID 25862456›Full record

ArticlePlant physiology2015

Biphenyl 4-Hydroxylases Involved in Aucuparin Biosynthesis in Rowan and Apple Are Cytochrome P450 736A Proteins.

Debabrata Sircar, Mariam M Gaid, Cornelia Chizzali, Dennis Reckwell, David Kaufholdt, Till Beuerle, Giovanni A L Broggini, Henryk Flachowsky, Benye Liu, Robert Hänsch and 1 more

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

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  11. The Genome Sequence of the Wild TomatoFrontiers in plant science · 2018
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  12. Molecular architectures of benzoic acid-specific type III polyketide synthases.Acta crystallographica. Section D, Structural biology · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 3 countries.

Debabrata SircarInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).ORCID http://orcid.org/0000-0002-2788-119X
Mariam M GaidInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).ORCID http://orcid.org/0000-0002-7290-0628
Cornelia ChizzaliInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).ORCID http://orcid.org/0000-0001-9337-4527
Dennis ReckwellInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).ORCID http://orcid.org/0000-0001-5449-0170
David KaufholdtInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).
Till BeuerleInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).ORCID http://orcid.org/0000-0001-5037-6653
Giovanni A L BrogginiInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).
Henryk FlachowskyInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).
Benye LiuInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).ORCID http://orcid.org/0000-0001-8527-565X
Robert HänschInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.).
Ludger BeerhuesInstitute of Pharmaceutical Biology (D.S., M.M.G., D.R., T.B., B.L., L.B.) and Institute of Plant Biology (D.K., R.H.), Technische Universität Braunschweig, 38106 Braunschweig, Germany;Plant Pathology, Institute of Integrative Biology, Eidgenössische Technische Hochschule Zürich, 8092 Zurich, Switzerland (C.C., G.A.L.B.); andJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Breeding Research on Horticultural and Fruit Crops, 01326 Dresden, Germany (H.F.) l.beerhues@tu-bs.de.ORCID http://orcid.org/0000-0002-2147-2731
Julius Kühn-Institut · DETechnische Universität Braunschweig · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Upon pathogen attack, fruit trees such as apple (Malus spp.) and pear (Pyrus spp.) accumulate biphenyl and dibenzofuran phytoalexins, with aucuparin as a major biphenyl compound. 4-Hydroxylation of the biphenyl scaffold, formed by biphenyl synthase (BIS), is catalyzed by a cytochrome P450 (CYP). The biphenyl 4-hydroxylase (B4H) coding sequence of rowan (Sorbus aucuparia) was isolated and functionally expressed in yeast (Saccharomyces cerevisiae). SaB4H was named CYP736A107. No catalytic function of CYP736 was known previously. SaB4H exhibited absolute specificity for 3-hydroxy-5-methoxybiphenyl. In rowan cell cultures treated with elicitor from the scab fungus, transient increases in the SaB4H, SaBIS, and phenylalanine ammonia lyase transcript levels preceded phytoalexin accumulation. Transient expression of a carboxyl-terminal reporter gene construct directed SaB4H to the endoplasmic reticulum. A construct lacking the amino-terminal leader and transmembrane domain caused cytoplasmic localization. Functional B4H coding sequences were also isolated from two apple (Malus × domestica) cultivars. The MdB4Hs were named CYP736A163. When stems of cv Golden Delicious were infected with the fire blight bacterium, highest MdB4H transcript levels were observed in the transition zone. In a phylogenetic tree, the three B4Hs were closest to coniferaldehyde 5-hydroxylases involved in lignin biosynthesis, suggesting a common ancestor. Coniferaldehyde and related compounds were not converted by SaB4H.

Indexed as

Amino Acid SequenceAryl Hydrocarbon HydroxylasesCells, CulturedCloning, MolecularCytochrome P-450 Enzyme SystemDNA, ComplementaryGas Chromatography-Mass SpectrometryGene Expression Regulation, PlantGene LibraryKineticsMalusMicrosomesMolecular Sequence DataNicotianaPhylogenyPhytoalexinsAryl Hydrocarbon Hydroxylasesaucuparinbiphenyl-4-hydroxylaseCytochrome P-450 Enzyme SystemDNA, ComplementaryPhytoalexinsPlant ProteinsRNA, MessengerSesquiterpenes

Identifiers

PMID25862456
PMCPMC4453778
OpenAlexW2033469697

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.