Evidence map›Paper›PMID 25861618›Full record

ArticleBioMed research international2015

Congenital heart defects are rarely caused by mutations in cardiac and smooth muscle actin genes.

Tatiana Khodyuchenko, Anna Zlotina, Tatiana Pervunina, Dmitry Zverev, Anna Malashicheva, Anna Kostareva

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Tatiana KhodyuchenkoInstitute of Molecular Biology and Genetics, Federal Almazov Medical Research Centre, 2 Akkuratova Street, Saint-Petersburg 197341, Russia.
Anna ZlotinaInstitute of Molecular Biology and Genetics, Federal Almazov Medical Research Centre, 2 Akkuratova Street, Saint-Petersburg 197341, Russia.
Tatiana PervuninaInstitute of Molecular Biology and Genetics, Federal Almazov Medical Research Centre, 2 Akkuratova Street, Saint-Petersburg 197341, Russia.
Dmitry ZverevEndovascular Surgery Department, Federal Almazov Medical Research Centre, 2 Akkuratova Street, Saint-Petersburg 197341, Russia.
Anna MalashichevaInstitute of Molecular Biology and Genetics, Federal Almazov Medical Research Centre, 2 Akkuratova Street, Saint-Petersburg 197341, Russia ; St. Petersburg State University, Universitetskaya Nab. 7/9, St. Petersburg 199034, Russia.
Anna KostarevaInstitute of Molecular Biology and Genetics, Federal Almazov Medical Research Centre, 2 Akkuratova Street, Saint-Petersburg 197341, Russia ; Department of Women and Child Health, Karolinska Institute, and Centre for Molecular Medicine, 17176 Stockholm, Sweden.
Federal Almazov North-West Medical Research Centre · RUKarolinska Institutet · SESt Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCongenital heart defects (CHDs) often have genetic background due to missense mutations in cardiomyocyte-specific genes. For example, cardiac actin was shown to be involved in pathogenesis of cardiac septum defects and smooth muscle actin in pathogenesis of aortic aneurysm in combination with patent ductus arteriosus (PDA). In the present study, we further searched for mutations in human α-cardiac actin (ACTC1) and smooth muscle α-actin (ACTA2) genes as a possible cause of atrial septum defect type II (ASDII) and PDA.

findingsTotal genomic DNA was extracted from peripheral blood of 86 individuals with ASDs and 100 individuals with PDA. Coding exons and flanking intron regions of ACTC1 (NM_005159.4) and ACTA2 (NM_001613) were amplified by PCR with specific primers designed according to the corresponding gene reference sequences. PCR fragments were directly sequenced and analyzed. Sequence analysis of ACTC1 and ACTA2 did not identify any nucleotide changes that altered the coding sense of the genes. In ACTC1 gene, we were able to detect one previously described nucleotide polymorphism (rs2307493) resulting in a synonymous substitution. The frequency of this SNP was similar in the study and control group, thus excluding it from the possible disease-associated variants.

conclusionsOur results confirmed that the mutations in ACTC1 gene are rare (at least <1%) cause of ASDII. Mutations in ACTA2 gene were not detected in patients with PDA, thus being excluded from the list of frequent PDA-associated genetic defects.

Indexed as

ActinsChild, PreschoolDNADuctus Arteriosus, PatentExonsFemaleGenetic Predisposition to DiseaseHeart Septal Defects, AtrialHumansMaleMuscle, SmoothMutation, MissensePolymorphism, Single NucleotideACTA2 protein, humanACTC1 protein, humanActinsDNA

Identifiers

PMID25861618
PMCPMC4377391
OpenAlexW2000521399

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.