Evidence map›Paper›PMID 25860644›Full record

ArticlePloS one2015

Epigenetic mechanisms contribute to the expression of immune related genes in the livers of dairy cows fed a high concentrate diet.

Guangjun Chang, Kai Zhang, Tianle Xu, Di Jin, Junfei Guo, Su Zhuang, Xiangzhen Shen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Guangjun ChangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, P. R. China.
Kai ZhangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, P. R. China.
Tianle XuCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, P. R. China.
Di JinCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, P. R. China.
Junfei GuoCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, P. R. China.
Su ZhuangCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing, P. R. China.
Xiangzhen ShenCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, P. R. China.
Nanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeEpigenetic modifications critically regulate the expression of immune-related genes in response to inflammatory stimuli. It has been extensively reported that a high concentrate (HC) diet can trigger systemic inflammation in dairy cows, yet it is unclear whether epigenetic regulation is involved in the expression of immune genes in the livers of dairy cows. This study aimed to investigate the impact of epigenetic modifications on the expression of immune-related genes. EXPERIMENTAL

designIn eight mid-lactating cows, we installed a rumen cannula and catheters of the portal and hepatic veins. Cows were randomly assigned to either the treatment group fed a high concentrate (HC) diet (60% concentrate + 40% forage, n = 4) or a control group fed a low concentrate (LC) diet (40% concentrate + 60% forage, n = 4).

resultsAfter 10 weeks of feeding, the rumen pH was reduced, and levels of lipopolysaccharide (LPS) in the rumen, and portal and hepatic veins were notably increased in the HC group compared with the LC group. The expression levels of detected immune response-related genes, including Toll-like receptor 4 (TLR4), cytokines, chemokines, and acute phase proteins, were significantly up-regulated in the livers of cows fed a HC diet. Chromatin loosening at the promoter region of four candidate immune-related genes (TLR4, LPS-binding protein, haptoglobin, and serum amyloid A3) was elicited, and was strongly correlated with enhanced expression of these genes in the HC group. Demethylation at the promoter region of all four candidate immune-related genes was accompanied by chromatin decompaction.

conclusionAfter HC diet feeding, LPS derived from the digestive tract translocated to the liver via the portal vein, enhancing hepatic immune gene expression. The up-regulation of these immune genes was mediated by epigenetic mechanisms, which involve chromatin remodeling and DNA methylation. Our findings suggest that modulating epigenetic mechanisms could provide novel ways to treat systemic inflammatory responses elicited by the feeding of a HC diet.

Indexed as

DietEpigenesis, GeneticAnimalsBinding SitesCattleChromatin Assembly and DisassemblyCpG IslandsDNA MethylationGene ExpressionGenetic LociHydrogen-Ion ConcentrationImmunityLipopolysaccharidesLiverMilkPromoter Regions, GeneticLipopolysaccharidesRNA, MessengerToll-Like Receptor 4Transcription Factors

Identifiers

PMID25860644
PMCPMC4393131
OpenAlexW2006447108

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.