Evidence map›Paper›PMID 25860641›Full record

ArticlePediatric cardiology2015

A Novel TBX1 Loss-of-Function Mutation Associated with Congenital Heart Disease.

Yun Pan, Zha-Gen Wang, Xing-Yuan Liu, Hong Zhao, Ning Zhou, Gui-Fen Zheng, Xing-Biao Qiu, Ruo-Gu Li, Fang Yuan, Hong-Yu Shi and 2 more

Abstract read
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In one paragraph

Article in Pediatric cardiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Review
  3. Human Genetics of Ventricular Septal Defect.Advances in experimental medicine and biology · 2024
    Article
  4. Review
  5. The TBX1/miR-193a-3p/TGF-Oxidative medicine and cellular longevity · 2022
    Article
  6. Article
  7. Association ofBalkan journal of medical genetics : BJMG · 2021
    Article
  8. Observational
  9. Article
  10. Heterozygous Mutations in TBX1 as a Cause of Isolated Hypoparathyroidism.The Journal of clinical endocrinology and metabolism · 2018
    Article
  11. Molecular genetics of 22q11.2 deletion syndrome.American journal of medical genetics. Part A · 2018
    Review
  12. Article
  13. Article
  14. Article
  15. Novel heterozygous mutation inClinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. MEF2C loss-of-function mutation contributes to congenital heart defects.International journal of medical sciences · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Yun PanDepartment of Pediatrics, Tongji Hospital, Tongji University School of Medicine, Shanghai, 200065, China.
Zha-Gen WangDepartment of Pediatrics, Tongji Hospital, Tongji University School of Medicine, Shanghai, 200065, China.
Xing-Yuan LiuDepartment of Pediatrics, Tongji Hospital, Tongji University School of Medicine, Shanghai, 200065, China. xingyuanliu69@163.com.
Hong ZhaoDepartment of Pediatrics, Tongji Hospital, Tongji University School of Medicine, Shanghai, 200065, China.
Ning ZhouDepartment of Pediatrics, Tongji Hospital, Tongji University School of Medicine, Shanghai, 200065, China.
Gui-Fen ZhengDepartment of Pediatrics, Tongji Hospital, Tongji University School of Medicine, Shanghai, 200065, China.
Xing-Biao QiuDepartment of Cardiology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, 200030, China.
Ruo-Gu LiDepartment of Cardiology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, 200030, China.
Fang YuanDepartment of Cardiology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, 200030, China.
Hong-Yu ShiDepartment of Cardiology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, 200030, China.
Xu-Min HouDepartment of Cardiology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, 200030, China.
Yi-Qing YangDepartment of Cardiology, Cardiovascular Research Laboratory, and Central Laboratory, Shanghai Chest Hospital, Shanghai Jiao Tong University, 241 West Huaihai Road, Shanghai, 200030, China. dryyq@tongji.edu.cn.
Shanghai Chest Hospital · CNTongji Hospital · CNShanghai Jiao Tong University · CNTongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Congenital heart disease (CHD) is the most prevalent type of birth defect in humans and is the leading non-infectious cause of infant death worldwide. There is a growing body of evidence demonstrating that genetic defects play an important role in the pathogenesis of CHD. However, CHD is a genetically heterogeneous disease and the genetic basis underpinning CHD in an overwhelming majority of patients remains unclear. In this study, the coding exons and splice junction sites of the TBX1 gene, which encodes a T-box homeodomain transcription factor essential for proper cardiovascular morphogenesis, were sequenced in 230 unrelated children with CHD. The available family members of the index patient carrying an identified mutation and 200 unrelated ethnically matched healthy individuals used as controls were subsequently genotyped for TBX1. The functional effect of the TBX1 mutation was predicted by online program MutationTaster and characterized by using a dual-luciferase reporter assay system. As a result, a novel heterozygous TBX1 mutation, p.Q277X, was identified in an index patient with double outlet right ventricle (DORV) and ventricular septal defect (VSD). Genetic analysis of the proband's available relatives showed that the mutation co-segregated with CHD transmitted in an autosomal dominant pattern with complete penetrance. The nonsense mutation, which was absent in 400 control chromosomes, altered the amino acid that was completely conserved evolutionarily across species and was predicted to be disease-causing by MutationTaster. Biochemical analysis revealed that Q277X-mutant TBX1 lost transcriptional activating function when compared with its wild-type counterpart. This study firstly associates TBX1 loss-of-function mutation with enhanced susceptibility to DORV and VSD in humans, which provides novel insight into the molecular mechanism underlying CHD and suggests potential implications for the development of new preventive and therapeutic strategies for CHD.

Indexed as

Child, PreschoolExonsFemaleGenetic Predisposition to DiseaseHeart Defects, CongenitalHeterozygoteHomeodomain ProteinsHumansMaleMutationPedigreeT-Box Domain ProteinsTranscription FactorsHomeodomain ProteinsT-Box Domain ProteinsTBX1 protein, humanTranscription FactorsCongenital heart diseaseGeneticsReporter geneTBX1Transcription factor

Identifiers

PMID25860641
OpenAlexW2076035729

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.